Facklamia hominis: R0V13_05945
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Entry
R0V13_05945 CDS
T09549
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
fhm
Facklamia hominis
Pathway
fhm00470
D-Amino acid metabolism
fhm00550
Peptidoglycan biosynthesis
fhm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fhm00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
R0V13_05945 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
R0V13_05945 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fhm01011
]
R0V13_05945 (murD)
Enzymes [BR:
fhm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
R0V13_05945 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
fhm01011
]
Precursor biosynthesis
Amino acid ligase
R0V13_05945 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
MurD_N
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
WPJ90086
LinkDB
All DBs
Position
complement(1219959..1221335)
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AA seq
458 aa
AA seq
DB search
MINWQSTSRVLVLGYGISSKSVIELLIKKGIRVRLNNQSDLSKDESVIRLKQKGVEVIDG
GHPLSVLDGIDWIVKSPIIPYELPLIQEALQQNIPIYTDVELAYQLNQSELIAVTGSNGK
TTTVSLIQKILDQGLEGNSYAAGNIGIPAIDVVQKAKAVDQVVMELSSFQLLGIDQLRPH
IAVFTNIYEAHLDYHKTRQAYIEAKLNLIRNLTSQDYLVYNADQEELASYFEDCPARKVP
FSRKLVIKEGAYCLNGYVYFQDKKIMKLEEIPLPGEHNVENVLAAVAVACIENVNPEIIR
TVVMNFEGIAHRIQWVGNYHKADFYNDSKATNPLASLTALRSFKDRDIVYFAGGLDRGND
FQELEEEFKKVKAAYLFGQSAKKIYTHLKVAEVPIIFLADTLEQAFKAFYDYPLEDEVVL
FSPACASWDQYPNYEVRGKAFCELVKGYLEEKEKNERN
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgattaattggcaaagtacttcccgagttttggtgttaggttatggcatctcaagtaaa
agtgtgattgaactattgattaagaaaggaatacgggttcgtttaaacaatcaatctgac
ttgtcgaaggatgagtctgtaataagattaaaacaaaagggtgttgaagtcattgatggg
gggcatcctttaagtgttttagatgggattgattggattgtaaaaagtccaattattcca
tatgaattacctttaattcaggaagcactgcagcaaaatattccaatttacacagatgta
gaattagcttaccagcttaatcagtctgaacttattgctgttactggctcaaatggaaag
acaacaacggtttctttaattcaaaaaatcttagatcaaggacttgagggtaatagttac
gcagcgggaaatattggaattccggctattgatgttgtgcaaaaggctaaagctgttgac
caagtcgtcatggaattatctagttttcagttattggggatcgatcaattaagacctcat
atcgctgtttttactaatatttatgaagcgcaccttgattatcataagacacgtcaagcg
tatatagaggctaagttgaatttgattagaaatttaacgagccaagattacttagtgtat
aatgccgatcaggaagagttggcttcctattttgaagattgtcctgccagaaaagttcct
ttttctagaaaattggttattaaagaaggtgcttattgtttaaatggctatgtgtatttt
caagataaaaaaattatgaaacttgaagaaattccacttccaggagaacataatgtagaa
aatgttttagcagcggtggcagtagcgtgtattgaaaacgttaatcctgaaatcattcgt
actgtggtaatgaactttgaagggattgctcatcgaattcagtgggtaggaaattatcat
aaagctgatttttataatgattctaaggcgacgaatcccttagcaagtttaactgcttta
agaagttttaaagatcgagatattgtatattttgcaggaggattagatcgcggaaatgac
tttcaagaattggaagaagaatttaagaaagttaaagcagcttatttatttggacaatct
gcaaaaaaaatatatactcatttaaaagtggcagaagtcccaataatttttttggcggat
acgcttgaacaagcatttaaggcattttatgattatcctttagaagatgaagtagttttg
ttctcgcctgcttgcgcatcttgggatcagtatccaaactatgaggtgcgaggaaaggca
ttctgtgaattagttaagggctatttagaggagaaggagaaaaatgaaagaaattaa
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