Facklamia hominis: R0V13_06015
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Entry
R0V13_06015 CDS
T09549
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
fhm
Facklamia hominis
Pathway
fhm00260
Glycine, serine and threonine metabolism
fhm00460
Cyanoamino acid metabolism
fhm00630
Glyoxylate and dicarboxylate metabolism
fhm00670
One carbon pool by folate
fhm00680
Methane metabolism
fhm01100
Metabolic pathways
fhm01110
Biosynthesis of secondary metabolites
fhm01120
Microbial metabolism in diverse environments
fhm01200
Carbon metabolism
fhm01230
Biosynthesis of amino acids
fhm01240
Biosynthesis of cofactors
fhm04981
Folate transport and metabolism
Module
fhm_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
fhm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
R0V13_06015 (glyA)
09102 Energy metabolism
00680 Methane metabolism
R0V13_06015 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
R0V13_06015 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
R0V13_06015 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
R0V13_06015 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
R0V13_06015 (glyA)
Enzymes [BR:
fhm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
R0V13_06015 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
WPJ90100
LinkDB
All DBs
Position
complement(1234279..1235508)
Genome browser
AA seq
409 aa
AA seq
DB search
MSQNNKVVFDLIEKERKRQLDGIELIASENYISEDVQKAQGSILSNKYAEGYPGKRYYGG
CEFVDQIEQLAIDRAKEIFGAVYANVQPHSGSSANLAVYRAFLQPGDKVLGMDLSQGGHL
THGSPANFSGQSYTMLAYGLDENEQLNYAQLEEIARSEKPKMIIAGASAYSKIIDFERIS
KVAKEVGAIFMVDMAHIAGLVAAGLHPNPVPVADVVTTTTHKTLRGPRGGMILTAHEEYA
KKLNSAIFPGIQGGPLEHVIAGKAVALGEVLDPSFKDYAQQIIKNAAAMAEVFKNSELRV
ISGGTENHVFLLDLNALDVSGKWAQERLEKVAITVNKNSIPNDQRSFVQTSGIRVGTPAI
TTRGLKEDEARHIADLIIRALKADESELPALREEAISIVAGKPFNAYQN
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaaacaataaagttgtatttgatttgattgaaaaggaaagaaaacgccaattg
gatgggattgaactaatcgcttctgaaaactacatttcagaagatgttcaaaaagctcaa
gggtcaattctttcaaataaatatgctgaaggctatcctggtaaacgctattatggtggt
tgtgaattcgttgaccaaattgaacagttagcaattgatcgagctaaagaaatttttggt
gcggtttatgcgaacgttcaaccacactctggttcttctgctaacttggctgtttatcgt
gcctttttacaacctggagataaagtattagggatggatctttcccaaggtggacattta
actcatggttctccagcaaacttctcaggtcagtcctatacaatgcttgcttacggattg
gatgagaacgaacaattaaattatgcacaacttgaagaaatcgcccgttctgaaaaacct
aaaatgattattgcgggtgcttctgcctattctaaaatcattgattttgaacgaattagt
aaagtcgctaaggaagttggagctatattcatggtcgatatggcgcatattgcggggctc
gttgcagctggtttgcatccaaatccagtacccgttgctgatgttgtgactaccacgact
cataagactttaaggggcccaagaggtggaatgatcttgacagctcacgaggaatatgct
aaaaaattaaatagtgctattttcccaggaattcaaggcggaccgcttgagcatgtgatt
gcaggtaaagcagttgctctgggtgaggttttagatccttcctttaaagattatgcacaa
caaattattaaaaatgcagctgctatggcggaagtatttaagaatagtgaattaagggtt
atttctggtgggacagaaaatcatgtatttttacttgatttaaatgcgctagatgtgtct
ggtaaatgggctcaagaacgtttagaaaaagtggcaatcacagttaataagaactctatt
cctaatgatcaacgttccttcgttcaaacttctggaatccgtgtgggtacacctgctata
actactcgtggcttgaaagaagacgaggctagacatattgcagatcttattattcgtgcc
ttaaaagcggatgaatctgaattacctgcattgcgtgaggaagctatctctattgttgcc
ggaaaaccttttaatgcttatcaaaactaa
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