Fusobacterium hominis: H9Q81_04305
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Entry
H9Q81_04305 CDS
T08638
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
fho
Fusobacterium hominis
Pathway
fho03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fho00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H9Q81_04305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fho03019
]
H9Q81_04305
03009 Ribosome biogenesis [BR:
fho03009
]
H9Q81_04305
Enzymes [BR:
fho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H9Q81_04305
Messenger RNA biogenesis [BR:
fho03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H9Q81_04305
Ribosome biogenesis [BR:
fho03009
]
Prokaryotic type
rRNA helicases
H9Q81_04305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Phage_Mu_Gp45
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QNM16054
UniProt:
A0A7G9GZ22
LinkDB
All DBs
Position
893249..894898
Genome browser
AA seq
549 aa
AA seq
DB search
MEKLEQFRNLGLGEKTIKALLKKGFEEPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAF
SLPILENFTPNGTIQAIVLTPTRELAGQVCEEMNTLAAGKKIKVTPVYGGQSIELQIRNL
KKGTDIVVGTPGRVMDLMDRKLIKLNNLKYFILDEADEMLNMGFVEDIEKILQATNEDKR
MLFFSATMPAEILKIAKNHMKEYEILAVKAKELTTNLTDQIYFEVNERDKFEALCRIIDL
TKDFYGIVFCRTKNDANELVGRLNDRGYDAEGLHGDISQNYREVTLKRFKAKKINILVAT
DVAARGIDVNDLSHVINYSIPQEAESYVHRIGRTGRAGKEGTAITFITPREYRRLLQIQK
TVKTEIRKERVPEIKDVIQAKKFRLMEDLNDILAQGDYENFKDFAKELLTGENSLDIIAA
LLKHSYDDILDENSYNEIGEIRLEKTGKVRLFIALGKKTGMNPKKLVDYIISKAKVDNRK
LKNVEVFENFSFVSVPFAEAETILAAFNEERNGKKPLIEKAKEKSKDGSSKGNERSAARP
VRRRKKENN
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaattagaacaatttagaaatttaggattaggagaaaaaactatcaaggcactt
ttaaagaaaggatttgaagaaccaactcctatacaagctcttactatacctgctctttta
aatggagataaggatataataggacaagctcaaacaggtacagggaaaacagctgcgttt
tcattaccaattttagaaaactttacacctaacggaactattcaagctatagttcttact
cctacaagagaacttgcaggacaagtttgtgaagaaatgaatactcttgcagcaggtaaa
aaaataaaagtaacacctgtatatggtggacaatcaatagaattacaaataagaaactta
aaaaaaggaactgatatagtagtaggaactccaggaagagttatggatcttatggataga
aaacttatcaaacttaataaccttaaatatttcatactagatgaagctgatgaaatgtta
aatatgggatttgttgaagatattgaaaaaattctacaagctactaatgaagataaaaga
atgttattcttttcagctacaatgccagctgaaattttaaaaatagctaaaaatcacatg
aaagaatatgaaattcttgcagttaaagctaaagaattaactactaatttaactgatcaa
atttattttgaagttaatgaaagagataaatttgaagctctttgtagaataattgactta
actaaagatttttatggtattgttttctgtagaactaaaaacgatgctaatgaacttgtt
ggtagattaaatgacagaggttatgatgctgaaggattacatggagatatcagtcaaaac
tatagagaagttactttaaaaagatttaaagctaaaaaaataaatattcttgttgctact
gacgttgctgcaagaggaatagatgttaatgacctatcacatgttataaactactctatt
ccacaagaagctgaaagttatgtacatagaataggaagaactggaagagcaggaaaagaa
ggtactgctatcacttttataactcctagagaatatagaagacttcttcaaattcaaaaa
actgtaaaaactgaaattagaaaagaaagagttcctgaaataaaagatgttatccaagct
aagaaatttagattaatggaagatttaaatgatatattagctcaaggagattatgaaaat
tttaaagatttcgcaaaagagcttttaactggagaaaattctttagatataatagctgct
cttttaaaacattcatatgatgatatattagatgaaaatagttataacgaaattggagaa
atcagacttgaaaaaacaggaaaagtaagattatttatagctcttggtaaaaaaacaggt
atgaaccctaaaaaacttgtagattatattatttcaaaagctaaagttgataatagaaaa
cttaaaaatgttgaagtatttgaaaacttctcattcgtttctgttccatttgctgaagct
gaaactatattagctgctttcaatgaagaaagaaatggtaaaaaaccacttattgaaaaa
gctaaagaaaaatctaaagatggttcaagcaaaggaaatgaaagatctgctgcaagacct
gttagaagaagaaaaaaagaaaataactaa
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