Fusobacterium hominis: H9Q81_07050
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Entry
H9Q81_07050 CDS
T08638
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
fho
Fusobacterium hominis
Pathway
fho03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fho00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
H9Q81_07050 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fho03021
]
H9Q81_07050 (rpoC)
03400 DNA repair and recombination proteins [BR:
fho03400
]
H9Q81_07050 (rpoC)
Enzymes [BR:
fho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
H9Q81_07050 (rpoC)
Transcription machinery [BR:
fho03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
H9Q81_07050 (rpoC)
DNA repair and recombination proteins [BR:
fho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
H9Q81_07050 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Apocytochr_F_C
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
QNM14726
UniProt:
A0A7G9GV94
LinkDB
All DBs
Position
complement(1449769..1453725)
Genome browser
AA seq
1318 aa
AA seq
DB search
MEIRSFEKIRIRLASPEKIEEWSHGEVTKPETINYRTLNPENDGLFCERIFGPVKDWECG
CGKYKRMRYKGLVCEKCGVEVTKSKVRRERMGHISLAAPVAHIWYSKGTPNKMALIIGLS
PKELESVLYFARYIVTESGESNLKEGKILTEKEYKLYKQLYGNKFEALMGAEAVLKLLEK
LDLDKLKDELEKELEDVSSAQKRKKIVKRLKIVRDFLSSENQPQWMILKNVPVIPADLRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKKLLEKRAPEIVVKNEKRMLQEAVDALIDNGR
RGKPVVAQNNRELKSLSDMLKGKQGRFRQNLLGKRVDYSARSVIVVGPSLKMNQCGIPKK
MALELYKPFIMRELVKRELATNIKTAKKLVEDADDRVWDVIEDVIQDHPVLLNRAPTLHR
LSIQAFEPVLIEGKAIRLHPLVCSAFNADFDGDQMAVHLMLSPEAIMEAKLLMLAPNNII
SPSNGEPIAVPSQDMVMGCFYMTKERPGAKGEGKMFSNIDQALTAYNNGVIETHAIIKVR
INGEMVETTPGRLMFNELLPDVDKQYHETFGKKQLKKLIAKLYDEHGFAETAELINKIKN
FGYHYGAMAGVSVGIEDLEIPASKKDILDAADREVAEIEADYKAGKIINEERYRKTITVW
SQATKAVGDAMMNGLDQFNPVYMMATSGARGNESQMRQLAAMRGNMADTQGRIIEVPIKA
NFREGLTVLEFFMSSHGARKGLADTALRTADSGYLTRRLVDISHEVIVNAEDCGTTEGIE
VGDLVSDGKVIEELKERINGRVLADDLVVDGVVIAERNTMIGKEIIKKIEEAGVKKVKIR
SPLTCSLEKGVCRKCYGMDLSNHKEILLGEAVGVVAAQSIGEPGTQLTMRTFHTGGVATA
AEVVTGTKADNSGKVVFRDVKTLKNDKTGEDVVVSQSAKLIIGNYDYEIPSGSVLKVQEG
QMVNEGDLLVTFDPFHIPIIADQDGRVEYRELFVKENYDEKYDVTEYMAVKPVESGDINP
RVVVFNEDGDLRGNYTIPFGAYLMVREGDTIKKGQIIAKIIKHGAGNKDITGGLPRVQEL
FEARNPKGKAMLTEVEGKVEVTGKKKKGMRVVLVKSITEPGMYKEYLVPVGDRLIVTDGM
LVKAGDKITEGAISPFDILNIKGLVAAEQFILESVQQVYRDQGVTVNDKHIEIIVKQMFK
KVKVVESGASLFLEDEVVERTLVDAENERLKAIGKPLITYEPVIQGITKAAVNTGSFISA
ASFQETTKVLSNAAIEGKVDYLEGLKENVIIGKKIPAGTGFNAYKKVRAKVIEDDLMK
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atggaaattagaagttttgagaaaataagaattagattggcatctcctgaaaagatcgaa
gaatggtcgcacggagaggttacaaaacctgaaactataaactatagaactttaaatccc
gaaaatgatggacttttctgcgaaagaattttcggaccagtaaaagactgggaatgtgga
tgcggaaaatataaaagaatgagatataaaggtttagtttgtgaaaaatgtggggttgag
gtaactaaatctaaggtgagaagagagagaatgggacacatttctctagctgctccagtt
gctcatatttggtattctaaaggaacaccaaacaaaatggcacttataatcggattatct
ccaaaagaacttgagtctgtactttacttcgctagatatatagttacagaatctggagag
agcaacttaaaagaaggtaaaatacttactgaaaaagagtataaattatacaaacaatta
tacggaaataaatttgaagctttaatgggagcagaagctgtattaaagttattagaaaaa
cttgatttagataaattaaaagatgaattagaaaaagagttagaagatgtaagttctgct
caaaagagaaagaagatagtaaaaagacttaaaatagtaagagacttcttatcttctgaa
aatcaacctcaatggatgatattgaaaaatgttccagttataccagctgatttaagacct
atggttcaattagatggtggaagatttgctacttctgatttaaatgatttatatagaaga
gttattaatagaaataacagacttaaaaaactattagaaaaaagagcacctgaaatcgtt
gttaaaaacgaaaaaagaatgcttcaagaagcagtagatgctttaatagataatggtaga
agaggaaaaccagtagttgctcaaaacaacagagagttaaaatcactatctgatatgtta
aaaggaaaacaaggtagatttagacaaaacctacttggaaaaagggttgactactcagca
agatcggttatcgttgtaggaccatcattaaaaatgaatcaatgtggaattcctaaaaag
atggctcttgaattatacaaacctttcattatgagagaacttgtaaaaagagaacttgct
actaatataaaaactgctaaaaaacttgttgaagatgcagatgacagagtatgggacgta
atcgaagatgttattcaagatcaccctgttttattaaacagagctccgactcttcacaga
ctttcaatacaagcatttgaaccagtacttatagaaggaaaagcaataagactacatccg
ttggtatgttcagcattcaatgcggactttgacggagaccaaatggctgttcacttaatg
ctttcaccagaagctataatggaagcaaaacttctaatgcttgcaccaaataatattatt
tctccatctaatggagaaccaatagcagttccatctcaagacatggttatgggatgtttc
tatatgacaaaagaaagaccaggagcaaaaggagaaggaaagatgttctcaaacatcgat
caagctctaacagcttataataatggtgttatagaaacacatgctattattaaagtaaga
ataaatggagaaatggtagaaactactccaggaagacttatgtttaatgaacttttacca
gatgtagataaacaatatcatgaaacttttggtaaaaaacaacttaaaaaattaattgct
aaattatatgatgaacacggatttgctgaaacagctgaattaattaataaaatcaaaaac
ttcggatatcactatggtgctatggcaggggtatcagtaggtatagaagacctagaaatc
ccagctagcaagaaagatattcttgatgcagcagatagagaagttgctgaaattgaagct
gattataaagcaggaaaaatcatcaacgaagaaagatatagaaaaacaatcactgtttgg
tctcaagctactaaagcggtaggagacgcaatgatgaacggtctagatcaattcaaccca
gtttacatgatggcgacttcaggagccagaggtaacgagtctcaaatgagacagcttgcg
gcaatgagaggaaacatggccgatacgcaaggaagaatcatcgaagtaccgatcaaagct
aacttccgtgaaggactaacagtattagaattctttatgtcatcacacggagctagaaaa
ggtctagcagatactgccctaagaactgccgattcaggatacttaacaagaagacttgtt
gatatttcacatgaagttatagttaatgctgaagattgtggaactacagaaggaatcgaa
gttggagatctagtatcagatggtaaagtaatcgaagaattaaaagaaagaatcaatggt
agagttttagcagacgaccttgtagtagatggagttgtaattgctgaaagaaatactatg
attggaaaagaaatcataaagaaaatagaagaagctggagttaaaaaggtaaaaatcaga
tcgccattaacatgttctcttgaaaaaggagtatgtagaaaatgttacggtatggacctt
tctaaccacaaagaaatcttacttggagaagccgttggagttgttgcagctcaatcaatc
ggagaaccaggtacacagcttacaatgagaacgttccatactggaggagttgcaacagca
gctgaagtagtaacaggaacaaaagctgacaacagtggtaaagttgtatttagagatgta
aaaacattgaaaaatgacaaaactggtgaagatgttgtagttagccaatcagctaaatta
attataggaaactatgactatgaaattccatcaggatcagtattaaaagttcaagaggga
caaatggttaacgaaggagacttactagttacatttgatccattccacatacctattatt
gctgaccaagacggaagagttgaatatagagaactattcgttaaagaaaactatgacgaa
aaatatgacgttacagaatacatggcagttaaaccagtagaatcaggagatatcaaccct
agagttgttgtatttaatgaggacggagatctaagaggaaactatacaattccatttgga
gcatatttgatggtaagagaaggagacacaattaaaaaaggtcaaattatcgcaaaaatc
atcaaacatggagctggaaacaaagacatcactggaggtcttccaagagttcaagagcta
tttgaagcaagaaatccaaaaggaaaagctatgcttactgaagtagaaggtaaggtagaa
gtaactggtaagaaaaagaaaggtatgagagttgttcttgttaaatctattacagaacca
ggaatgtacaaagaatacctagtaccagttggagatcgtctaatagtaactgacggtatg
ttagtaaaagctggagataagataacagaaggagctatttctccatttgacatcttaaat
atcaaaggtcttgtagcagctgagcagttcatacttgagtctgtacaacaagtgtataga
gatcaaggtgttacagtaaatgataaacacattgaaattatagttaaacaaatgtttaag
aaagtaaaagtagttgaatcgggagcttcattattcttagaagatgaagttgtagaaaga
acactagtagatgctgaaaatgaaagattaaaagctattggaaaaccattaattacttat
gaaccagtaattcaaggtattacaaaagctgctgttaatacaggaagtttcatttctgca
gcgtcattccaagaaactacaaaagttttatcaaatgcagctatcgaaggaaaagttgac
tatttggaaggacttaaagaaaatgtaatcatcggtaagaaaataccggctggaacagga
tttaacgcttacaaaaaagtaagagctaaagttatagaagatgacttgatgaaatag
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