Flavobacterium humidisoli: M0M44_03260
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Entry
M0M44_03260 CDS
T08925
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
fhu
Flavobacterium humidisoli
Pathway
fhu02020
Two-component system
fhu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fhu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
M0M44_03260 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
M0M44_03260 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fhu03021
]
M0M44_03260 (rpoN)
Transcription machinery [BR:
fhu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
M0M44_03260 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
LacI
Motif
Other DBs
NCBI-ProteinID:
UPZ16366
UniProt:
A0ABY4LX32
LinkDB
All DBs
Position
692208..693668
Genome browser
AA seq
486 aa
AA seq
DB search
MLKQFLNLKLSQKLSPQQIQLMKLIQLPTQAFEQRLLEEMNENPALEAGKEDDYEADEYA
NEDYDDYDDAESDRIEADDINIDEYLSDDDMPDYKTQVNNYSDDEERETPFAAPISFHQD
LINQLNTFILNDEEREIAEFLVGSIDDMGYIRRSIPDIVDDMAFTQGIYTDEAMVEKMMT
VIHELEPSGVGARDLQECLLLQLKHKTPTEYVDLAIDIIENQFDAFTKKHYDKLLQKYSI
SNEQLKKAIHEIERLNPKPGGSFTGNNKVTENIVPDFAIRIVDGELELTLNGRNAPSLHV
SKDYQEMMQTYKESRDKSTAQKDAVQFIKQKLDSAKWFIDAIRQRQETLFVTMNAIMHYQ
EEYFLDGDETKLKPMILKDIADMVGLDISTISRVANSKYVETPYGTKLIKEFFSEAMKND
QGEDVSTLEIKKILQNTIEEEDKRKPLPDDQLAEILKEKGYPIARRTIAKYREQLDIPVA
RMRKKI
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgctaaagcaatttttaaatttaaaattatcccaaaaattatctccacagcaaattcag
ctgatgaagttaattcaattgcctacgcaagcttttgaacagcgtttattagaagaaatg
aacgaaaatccagctctggaagctggtaaagaagacgattacgaagctgatgaatacgct
aatgaagactacgacgattatgatgatgcagaatctgacagaatcgaagcagacgacatt
aacattgatgaatatctaagcgacgacgatatgcctgattacaaaactcaggtaaacaat
tacagtgacgatgaagaacgcgaaacgccttttgcggctcccatcagttttcatcaggac
ttaatcaatcagttgaatacttttattttgaatgatgaagaacgcgaaatcgctgaattc
cttgttggaagtattgatgatatgggttatatccgtagaagtattccagatattgtagac
gacatggctttcactcagggaatttatactgatgaagcaatggtcgagaaaatgatgacg
gtaattcatgagcttgaaccttcaggtgttggagcacgtgatttgcaggaatgtctactt
cttcagttaaaacataaaactccaactgaatatgttgatttagcgattgacattatcgaa
aatcagtttgatgcttttacgaaaaaacattacgataaattattacagaaatacagcatt
tccaacgaacagcttaaaaaagcaattcacgaaattgaacgtttgaacccaaaaccaggc
ggttcttttacgggaaacaataaagttacagaaaacattgttcccgattttgccatcaga
attgtagatggcgaattagaactgaccctaaacggaagaaatgctccttctttgcacgtt
tctaaagattatcaggaaatgatgcagacgtataaagaatcccgtgataaatcgactgcg
cagaaagatgccgttcagtttatcaaacaaaaactggattctgctaaatggtttatcgat
gccatcagacaacgtcaggaaactctttttgtaaccatgaatgcgattatgcattatcaa
gaagaatatttcttagacggcgatgaaaccaaactaaaaccaatgatcttaaaagacatt
gctgatatggttggtttggatatttctacgatttcgcgtgtagccaacagcaaatatgtt
gaaacgccatatggaacaaaactgattaaagagtttttctctgaagccatgaaaaatgat
cagggagaagacgtttcaactttagaaatcaaaaaaattcttcaaaataccattgaagaa
gaagataagagaaaaccgcttccagacgatcaattggccgaaatcttaaaagaaaaaggg
tatccgattgcgagaaggactattgcaaaatatcgtgaacagttggatattccagtggcg
agaatgagaaagaaaatttag
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