KEGG   Flavobacterium humidisoli: M0M44_03260
Entry
M0M44_03260       CDS       T08925                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
fhu  Flavobacterium humidisoli
Pathway
fhu02020  Two-component system
fhu02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:fhu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    M0M44_03260 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    M0M44_03260 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fhu03021]
    M0M44_03260 (rpoN)
Transcription machinery [BR:fhu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     M0M44_03260 (rpoN)
SSDB
Motif
Pfam: Sigma54_CBD Sigma54_DBD Sigma54_AID LacI
Other DBs
NCBI-ProteinID: UPZ16366
UniProt: A0ABY4LX32
LinkDB
Position
692208..693668
AA seq 486 aa
MLKQFLNLKLSQKLSPQQIQLMKLIQLPTQAFEQRLLEEMNENPALEAGKEDDYEADEYA
NEDYDDYDDAESDRIEADDINIDEYLSDDDMPDYKTQVNNYSDDEERETPFAAPISFHQD
LINQLNTFILNDEEREIAEFLVGSIDDMGYIRRSIPDIVDDMAFTQGIYTDEAMVEKMMT
VIHELEPSGVGARDLQECLLLQLKHKTPTEYVDLAIDIIENQFDAFTKKHYDKLLQKYSI
SNEQLKKAIHEIERLNPKPGGSFTGNNKVTENIVPDFAIRIVDGELELTLNGRNAPSLHV
SKDYQEMMQTYKESRDKSTAQKDAVQFIKQKLDSAKWFIDAIRQRQETLFVTMNAIMHYQ
EEYFLDGDETKLKPMILKDIADMVGLDISTISRVANSKYVETPYGTKLIKEFFSEAMKND
QGEDVSTLEIKKILQNTIEEEDKRKPLPDDQLAEILKEKGYPIARRTIAKYREQLDIPVA
RMRKKI
NT seq 1461 nt   +upstreamnt  +downstreamnt
atgctaaagcaatttttaaatttaaaattatcccaaaaattatctccacagcaaattcag
ctgatgaagttaattcaattgcctacgcaagcttttgaacagcgtttattagaagaaatg
aacgaaaatccagctctggaagctggtaaagaagacgattacgaagctgatgaatacgct
aatgaagactacgacgattatgatgatgcagaatctgacagaatcgaagcagacgacatt
aacattgatgaatatctaagcgacgacgatatgcctgattacaaaactcaggtaaacaat
tacagtgacgatgaagaacgcgaaacgccttttgcggctcccatcagttttcatcaggac
ttaatcaatcagttgaatacttttattttgaatgatgaagaacgcgaaatcgctgaattc
cttgttggaagtattgatgatatgggttatatccgtagaagtattccagatattgtagac
gacatggctttcactcagggaatttatactgatgaagcaatggtcgagaaaatgatgacg
gtaattcatgagcttgaaccttcaggtgttggagcacgtgatttgcaggaatgtctactt
cttcagttaaaacataaaactccaactgaatatgttgatttagcgattgacattatcgaa
aatcagtttgatgcttttacgaaaaaacattacgataaattattacagaaatacagcatt
tccaacgaacagcttaaaaaagcaattcacgaaattgaacgtttgaacccaaaaccaggc
ggttcttttacgggaaacaataaagttacagaaaacattgttcccgattttgccatcaga
attgtagatggcgaattagaactgaccctaaacggaagaaatgctccttctttgcacgtt
tctaaagattatcaggaaatgatgcagacgtataaagaatcccgtgataaatcgactgcg
cagaaagatgccgttcagtttatcaaacaaaaactggattctgctaaatggtttatcgat
gccatcagacaacgtcaggaaactctttttgtaaccatgaatgcgattatgcattatcaa
gaagaatatttcttagacggcgatgaaaccaaactaaaaccaatgatcttaaaagacatt
gctgatatggttggtttggatatttctacgatttcgcgtgtagccaacagcaaatatgtt
gaaacgccatatggaacaaaactgattaaagagtttttctctgaagccatgaaaaatgat
cagggagaagacgtttcaactttagaaatcaaaaaaattcttcaaaataccattgaagaa
gaagataagagaaaaccgcttccagacgatcaattggccgaaatcttaaaagaaaaaggg
tatccgattgcgagaaggactattgcaaaatatcgtgaacagttggatattccagtggcg
agaatgagaaagaaaatttag

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