Flavobacterium humidisoli: M0M44_06425
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Entry
M0M44_06425 CDS
T08925
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
fhu
Flavobacterium humidisoli
Pathway
fhu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fhu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
M0M44_06425 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fhu01007
]
M0M44_06425 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fhu03016
]
M0M44_06425 (aspS)
03029 Mitochondrial biogenesis [BR:
fhu03029
]
M0M44_06425 (aspS)
Enzymes [BR:
fhu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
M0M44_06425 (aspS)
Amino acid related enzymes [BR:
fhu01007
]
Aminoacyl-tRNA synthetase
Class II (A)
M0M44_06425 (aspS)
Transfer RNA biogenesis [BR:
fhu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
M0M44_06425 (aspS)
Prokaryotic type
Other AARSs
M0M44_06425 (aspS)
Mitochondrial biogenesis [BR:
fhu03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
M0M44_06425 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
tRNA-synt_2d
DUF6478
Motif
Other DBs
NCBI-ProteinID:
UPZ16976
UniProt:
A0ABY4LZC7
LinkDB
All DBs
Position
complement(1409101..1410852)
Genome browser
AA seq
583 aa
AA seq
DB search
MYRSHNCGELNASNINTEVTLAGWVQKSRDKGFMNWVDLRDRYGITQLIFDESRTNKTVF
ELAKTLGREFVIQVKGTVIEREAKNKNIPTGEIEILVSELTILNTALTPPFTIEDETDGG
EDIRMKYRYLDIRRNPVKNSLLFRHKVAMEVRKYLSDLDFCEVETPYLIKSTPEGARDFV
VPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQPEFTQIDCEMA
FVEQEDILNIFEGLTRHLLKEIKGIEVDKFPRITYDYAMKTYGNDKPDIRFGMKFGELNE
FAQHKEFPVFNAAELVVGIAVPGAGNYTRKEIDGLIDWVKRPQVGASGMVYVKCNEDGTY
KSSVDKFYDQDDLTNWAKATEANPGDMIFVLSGPANKTRAQLSALRMELATRLGLRNPEE
FAPLWVVDFPLLELDEESGRYHAMHHPFTSPKPEDMALLETEPGKVRANAYDMVLNGNEI
GGGSIRIHDKATQQLMFKYLGFTEEEAKAQFGFLMDAFQFGAPPHGGLAFGLDRLVAILG
GQETIRDFIAFPKNNSGRDVMIDAPAAIDDAQLKELRIKVDIA
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtatagaagtcataattgtggcgaattaaacgcttcaaatattaataccgaagttaca
cttgcgggctgggttcaaaaatcacgtgataaaggatttatgaattgggtcgatttacgt
gaccgttacggaattacacaacttatttttgacgaaagtcgtactaataaaactgttttt
gaattggcaaaaacacttggacgtgaatttgtaattcaagtaaaaggaactgttattgag
cgtgaagctaaaaataaaaacatcccaactggtgaaattgaaattttagtttcagaatta
acaattttaaacactgcacttactcctccttttacaattgaagatgaaactgatggcgga
gaagatatcagaatgaaataccgttatttggatatcagaagaaatcctgtaaaaaacagt
ttattattccgtcataaagtagcgatggaagttcgcaaatatctttctgatttagatttc
tgtgaagttgaaactccttacttaatcaaatcgactcctgagggtgcgagagatttcgtt
gtaccaagccgtatgaacgaaggacaattttacgcattgccacagtctccacaaactttc
aaacaacttttgatggttggcggaatggataaatatttccaaattgtgaaatgtttccgt
gatgaagatttacgtgcagaccgtcagccagagtttactcagattgactgcgaaatggca
tttgtagagcaagaagatatcttgaatatttttgaaggattgacaagacacttattaaaa
gaaattaaaggcattgaagtagataaattccctagaattacttacgactacgccatgaaa
acatacggaaacgacaaaccagacattcgtttcggaatgaagtttggagagttaaacgaa
tttgcgcagcataaagaattccctgtatttaatgcagctgaattagttgtgggaattgct
gttccaggagcaggaaattatactcgtaaagaaatcgacgggttaattgactgggttaaa
cgtccacaagttggagcatcaggaatggtttacgtaaaatgcaacgaagacggaacttat
aaatcatctgtagataaattctacgatcaagacgatttgacaaactgggcaaaagcaaca
gaagcaaatcctggagatatgatttttgttctttctggtccagcaaacaaaacacgcgct
cagctttctgctttacgtatggaattagcaactcgtttaggcttacgtaaccctgaagaa
tttgctccattatgggttgtagatttcccattattagagttagacgaagaaagcggtcgt
taccatgcaatgcaccatccatttacttctccaaaaccagaagatatggctttactggaa
acagaaccaggaaaagttcgtgcaaatgcttatgatatggttttaaacggaaacgaaatt
ggtggtggatctattcgtattcatgataaagctactcagcagttaatgtttaaatattta
ggatttaccgaagaagaagcaaaagcacaatttgggttcttaatggatgctttccaattt
ggagcaccgcctcacggaggacttgcttttggtcttgacagacttgtggcaattcttgga
ggtcaggaaacaatcagagatttcatcgctttccctaaaaacaattcaggacgtgatgta
atgatagatgctcctgctgcaattgacgacgcacaattgaaagaacttcgcattaaagta
gatattgcttaa
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