Flavobacterium humidisoli: M0M44_08345
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Entry
M0M44_08345 CDS
T08925
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
fhu
Flavobacterium humidisoli
Pathway
fhu03030
DNA replication
fhu03410
Base excision repair
fhu03420
Nucleotide excision repair
fhu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fhu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M0M44_08345 (polA)
03410 Base excision repair
M0M44_08345 (polA)
03420 Nucleotide excision repair
M0M44_08345 (polA)
03440 Homologous recombination
M0M44_08345 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fhu03032
]
M0M44_08345 (polA)
03400 DNA repair and recombination proteins [BR:
fhu03400
]
M0M44_08345 (polA)
Enzymes [BR:
fhu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M0M44_08345 (polA)
DNA replication proteins [BR:
fhu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
M0M44_08345 (polA)
DNA repair and recombination proteins [BR:
fhu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
M0M44_08345 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M0M44_08345 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
UPZ17350
LinkDB
All DBs
Position
complement(1854368..1857208)
Genome browser
AA seq
946 aa
AA seq
DB search
MSTQKRLFLLDAYALIFRGYYAFIKNPRINSKGMDTSAIMGFMNSLLDVIKREKPDHLAV
AFDKGGSHVRTEMFVEYKANRDATPEAIKIAIPYIQELLRAMHIPIIEIEGCEADDLIGT
IAKQAEKQNYKVYMVTPDKDFAQLVSENIFMYKPARMGNGIEIWGVPEVLAKFEIERPEQ
VIDFLGMMGDAVDNIPGLPGVGEVTAKKFLKEFGTMENLLENTHLLKGKMKENIEANKEK
GILSKKLAAIITDCDVTFNEEDYELSRPDIEKTDAIFQELEFRRMAEQFDNLFKTDGTQI
AAPASDAKIYKKAQPKNEDQFDLFGGGNTNGENAEIERTSFYNTLENTEHFYQTIQGDLG
IKMLLQNLQKQTSVCFDTETTGIDALHAELVGMSFAYEKGKAFYVPFPESQEEAQALVDK
FIPFFENDNIEKIGQNLKYDLKILSNYGVTVKGKLFDTMIAHYLINPDMRHNMDILAETY
LKYSPKSIETLIGKKGKNQLNMRDVPLEDIKEYAAEDADVTLQLKEIFTTELDKTETKKL
FDEIEIPLVSVLADMETEGIRLDVDFLKAMSSEMEVEIKSLEEKIYETAGEKFNLASPKQ
LGDILFDKLKIGGAKQKKTKTGQYATGEEVLTYLANDNPIVKQILDWRQMVKLQSTYILA
LPEQVDKKTLRVHTDYMQTVAATGRLSSNNPNLQNIPIRTERGRQIRKAFVARDENYTLI
SADYSQIELRIIAALSGEENMIAAFQNGEDIHRATAAKVFDVALEEVSREQRSNAKTVNF
GIIYGVSAFGLSNQTSLSRSESAALIDAYYKTYPRLKSYISEQIEFAREKGYVQTILGRR
RYLKDINSANAVVRSAAERNAVNAPIQGSAADVIKIAMINIHKKLRDENWKSKMLLQVHD
ELVFDVHNDELEKIQPMIKHEMENAFKMSVPLEVELGMGKDWLEAH
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactcaaaaacgcctttttcttctagatgcttatgcactaatttttcgtggttat
tatgcttttataaaaaacccgagaatcaactcaaaaggaatggatacatctgcaattatg
ggttttatgaactcacttttggatgttattaaaagagaaaaaccagatcatttagccgtt
gcttttgataaaggcggtagccatgtaagaaccgaaatgttcgtcgaatataaagccaat
cgtgatgcaacgccagaggctattaaaattgccattccgtatattcaggaattattgcga
gcaatgcatattcctattattgaaatcgagggctgtgaagccgatgacttaattggaaca
atcgctaagcaagcagaaaaacaaaactacaaagtctacatggtaactccagataaggat
tttgcccaactagtttctgaaaacatctttatgtataaaccggcccgaatgggtaacgga
atcgaaatctggggcgttcctgaggttttggcaaaatttgaaatcgaaagaccagaacaa
gtaattgattttcttggaatgatgggcgacgccgtggataatattcctggattgcctgga
gttggagaagttacagccaaaaagttcctgaaagaatttggaacaatggaaaacctttta
gaaaacacacatttactaaaaggcaaaatgaaagagaacatagaagctaacaaggaaaaa
ggtattctttctaaaaaattagccgcaattatcaccgattgtgatgttactttcaatgaa
gaagattacgaactttctcgtcctgatatcgaaaaaacagatgctatttttcaggaattg
gaatttagaagaatggcagaacagtttgacaatttatttaaaactgatggcactcaaatt
gctgctccagcttctgatgccaaaatatacaaaaaagctcagcctaaaaacgaagatcaa
tttgatctttttggaggcggaaatacgaatggagaaaatgctgaaatcgaaagaacttcg
ttttataacactttagaaaacaccgagcatttttaccaaaccattcaaggtgatttaggt
attaaaatgcttttacaaaatttacaaaaacagacttcggtttgttttgacactgaaacc
acaggaatcgatgctttgcacgcagaactggttggaatgtcttttgcttacgagaaagga
aaagcattttatgttccgttcccagaaagtcaggaagaagcacaagctttagttgacaaa
tttattccgttttttgaaaatgacaacattgaaaaaatcggacagaatttaaaatacgat
ctaaaaatcctttctaattatggtgtaaccgtaaaaggaaaactttttgatacgatgatt
gcgcattatttgattaatccagatatgcgtcacaacatggatattttagccgaaacatat
ttgaaatattctcctaaatctattgaaactttaattggtaaaaaaggaaaaaatcagctt
aatatgcgcgacgttcctttagaagatattaaagaatatgctgctgaagatgcagatgtt
actttacaattaaaagaaatcttcacaaccgaattagataaaacagaaactaaaaagtta
tttgacgaaatcgaaattccattagtaagcgtattggccgacatggaaacggaaggaatt
cgtttggatgtagatttcttaaaagcaatgtcttctgaaatggaagttgaaatcaaatct
ttagaagaaaaaatatatgaaactgctggcgagaaattcaacttggcctctccaaaacaa
ttaggagatattttatttgacaaactaaaaattggtggtgcaaagcaaaagaaaaccaaa
acgggtcaatacgcaactggcgaagaagttttaacttatttagcgaatgataacccaatt
gtaaaacagattttagactggcgccagatggtaaaacttcaaagcacttatattttggct
ttaccagaacaggttgacaaaaagactttacgcgttcatactgattatatgcagacggtt
gcggcaacgggacgtttgagctctaataatccgaacttgcagaatattccgattcgtacc
gaaagaggccgtcagatacgtaaagctttcgtagcacgcgatgaaaattatactttaatc
tctgccgattactcgcaaattgaattgaggattatcgctgctttgagtggtgaagaaaat
atgatcgccgctttccagaacggagaagacattcacagagcgaccgcagcaaaagttttt
gacgtagctttagaagaagtttcccgcgaacaaagaagtaatgcgaaaacagtaaacttt
ggaatcatatatggcgtttctgcttttggattgagtaatcagacttctctatctagaagt
gaaagtgctgctttgatcgatgcttattacaaaacatatcctcgtcttaaatcttatatt
tcagaacaaattgaatttgctcgcgaaaaaggttatgtacaaaccattttaggtcgtcgc
cgttatttaaaagatattaattcagccaatgccgttgtaagaagtgctgctgaacgaaat
gctgtaaatgccccaattcagggaagcgctgccgatgtgatcaaaattgcgatgatcaac
attcataaaaaacttcgtgatgaaaactggaaatctaaaatgctacttcaggtgcatgat
gagcttgtgttcgatgttcacaacgatgaactcgaaaaaatccagcctatgattaaacat
gaaatggaaaatgcatttaaaatgtctgttcctttagaagttgaattaggaatgggtaaa
gattggctagaagcgcattaa
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