Flavobacterium humidisoli: M0M44_12770
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Entry
M0M44_12770 CDS
T08925
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
fhu
Flavobacterium humidisoli
Brite
KEGG Orthology (KO) [BR:
fhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fhu03032
]
M0M44_12770 (gyrB)
03400 DNA repair and recombination proteins [BR:
fhu03400
]
M0M44_12770 (gyrB)
Enzymes [BR:
fhu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
M0M44_12770 (gyrB)
DNA replication proteins [BR:
fhu03032
]
Prokaryotic type
DNA Topoisomerases
M0M44_12770 (gyrB)
DNA repair and recombination proteins [BR:
fhu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
M0M44_12770 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
UPZ13620
LinkDB
All DBs
Position
2986776..2988716
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AA seq
646 aa
AA seq
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MSEEIKKNNYSADSIQALEGMEHVRMRPSMYIGDVGVRGLHHLVYEVVDNSIDEAMGGHC
DTIGVSINEDGSITVEDNGRGIPVDLHKKEGVSALEVVMTKIGAGGKFDKDSYKVSGGLH
GVGVSVVNALSVHMKSTVFREGKIYEQEYERGKSLYPVKQIGETDKRGTRQTFYPDDTIF
TQTTEFSYDTLSARMRELSFLNKGITITFTDKREVDEKGEFRSEVFHSDEGLKEYIRYLD
GNREPIVSHVISMDNDKGEIPVEVALIYNTSYTENIFSYVNNINTHEGGTHLQGFRSGLT
RTLKKYADASGLLDKLKFEIAGDDFREGLTAIISVKVSEPQFEGQTKTKLGNREVVSPVS
QAVGEMLENYLEENPNDAKLIIQKVILAAQARHAAKKAREMVQRKTVMGGGGLPGKLSDC
SEQDPARCEVYLVEGDSAGGTAKQGRDRNFQAILPLRGKILNVEKAMHHKVFENEEIRNI
FTALGVTVGTAEDSKALNLEKLRYHKVIIMCDADVDGSHISTLILTFFFRFMKELIEEGH
VYIAAPPLYLVKKGNKKEYAWNDVQRDQANERMGGSANIQRYKGLGEMNAEQLWETTMDP
NFRTLRQVNIDSLAEADQVFSMLMGDEVPPRREFIEKNAVYANIDA
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaaatcaagaagaacaattattcagcagatagtattcaggcattagaagga
atggagcacgtaagaatgcgtccatcaatgtatattggagatgtaggagttcgaggactg
catcatttagtttatgaggttgttgataactctattgatgaggccatgggagggcattgt
gatactattggtgtctcaataaacgaagatggttctattacagttgaagataacggacgt
ggtattccagtagatttacataaaaaagaaggggtttctgctcttgaggttgtaatgaca
aaaattggagccggaggtaaattcgacaaagattcatataaagtttctggaggtttacac
ggggttggggtttcggttgtaaatgccctttctgttcacatgaaatctactgtatttaga
gaaggtaagatttatgagcaagaatacgaaagaggaaaatctttatatccagttaaacaa
atcggagaaacagataaaagaggtacaagacagactttttatccagatgataccatcttt
actcaaactactgagttttcatacgatacgctttcagctcgtatgcgtgagctttctttc
ttaaataaaggaatcacaattacttttacagataagagagaagttgatgaaaaaggcgaa
tttagaagtgaggtattccattctgatgaagggcttaaagaatatattcgttatttagat
ggtaaccgtgagccaattgtatctcatgttatcagtatggataatgataaaggagaaatt
ccagttgaggttgccttaatttataatacaagttatacagagaatattttttcttacgta
aacaatatcaatacgcacgaaggaggaacgcatttacaaggttttagaagtggtttaaca
agaacgcttaaaaaatatgcagatgcttcgggtttattagataaattaaaattcgaaatt
gctggtgatgacttccgtgaaggattaacagctattatttcggtaaaagtgtctgaacct
caatttgaagggcaaacgaagactaagcttggaaatagagaagttgtttctccggtttct
caagcggttggagaaatgttggagaattatttggaagaaaatccaaatgacgcgaaattg
attattcaaaaagtaatcttagcagctcaagcacgtcacgcagcgaaaaaagctcgtgaa
atggtacagcgtaaaaccgttatgggcggtggaggattgcctggtaaattatctgactgt
tcagagcaagatccagcaagatgtgaggtttaccttgtcgagggagattcggctggtgga
acagcaaaacaaggacgtgatcgtaactttcaagcgattctgccattacgtggtaaaatc
ttgaacgttgaaaaagcgatgcatcataaagtattcgaaaatgaagagattagaaatatc
tttacagcattaggggttacggtaggaactgcagaagatagtaaagcattaaatcttgaa
aaactaagatatcacaaggtaatcatcatgtgtgatgccgatgtcgatggtagtcacatt
tctaccttaatattaacgttcttcttccgtttcatgaaagagcttattgaagaaggccac
gtttacattgcagcgccgcctttatacttagttaagaaagggaataagaaagaatacgct
tggaatgatgttcagcgtgatcaggctaacgaaagaatgggaggaagtgccaatattcag
cgttataaaggtcttggagagatgaacgcggagcaattgtgggaaactacaatggatccg
aatttcagaactttacgtcaagtaaatattgatagccttgcagaagctgaccaagttttc
tctatgttgatgggtgatgaagtgccgcctcgtagagaatttatcgagaaaaatgcagtt
tatgcaaatattgatgcataa
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