Flavobacterium humidisoli: M0M44_14360
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Entry
M0M44_14360 CDS
T08925
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
fhu
Flavobacterium humidisoli
Pathway
fhu00040
Pentose and glucuronate interconversions
fhu01100
Metabolic pathways
fhu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fhu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
M0M44_14360
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
M0M44_14360
Enzymes [BR:
fhu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
M0M44_14360
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pectate_lyase_5
Motif
Other DBs
NCBI-ProteinID:
UPZ13934
UniProt:
A0ABY4LNX2
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Position
complement(3340489..3341604)
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AA seq
371 aa
AA seq
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MNLKSKLSMFAAALIFGFTACNSEEIASNTEASTPTNETTVETPATNPTGKIGNCAEVPG
WASQNGGTTGGGSAAETTVTTYAQLKSAIENTSVKVIKVSGTITITTRLSFQDQTGKTIY
GASGAKLVSTNQTKDGSGIINIKRCKNIIIRNLIFEGPGAYDTDGWDNAILDECTNVWVD
HCEFRDGVDGNFDIKNKSDYISVTYSKFHYLKPPKAGGSGGSDDHRYSNLIGSSDGATAD
RGKLRITFARCWWAPGCKERMPRVRFGKVHIVNSFFNSTVSNKCIAAGFEANIFVESNVF
EGVKNPIDLMSGYTAVTATDNVFTSVTGTQAGSGTAFTPPYSIVKLAKTAVKADVSANAG
PTLGGNVCGSF
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaacttaaaatcaaaactttcaatgttcgctgcagcattgattttcggatttacggca
tgtaattctgaagaaatcgcttcaaacactgaagcaagtactccaacaaatgaaacaacc
gttgaaacacctgcaaccaatccaacgggtaaaatcggaaactgtgctgaagttcctgga
tgggcttctcaaaacggaggcacaacaggtggtggctctgctgccgaaactacagttact
acttatgctcagttgaaatcggctattgagaacacttctgtaaaagtgattaaagtctct
ggaaccattacaattacaacaagattgtcttttcaagatcaaactggaaaaacaatttat
ggagcaagtggagcaaaattagtttcaacgaatcaaaccaaagatggttctggaatcatc
aacattaaaagatgtaaaaacatcatcatcagaaacttgatttttgaaggtccaggcgct
tacgacactgacggatgggataatgcaatccttgacgaatgtacaaacgtttgggtagat
cattgcgaatttagagatggtgttgatggaaacttcgacatcaaaaacaaatcagattat
atctcggttacgtattctaaatttcattatttaaaaccaccaaaagcaggcggttctgga
ggatcagatgatcatagatattcaaatttaattggttcaagcgatggtgcaactgctgat
cgcggtaaattgagaatcacttttgcaagatgctggtgggctccaggctgtaaagaaaga
atgccaagagttcgttttggaaaagtgcatattgtaaacagtttctttaacagcacagta
agcaacaaatgtatcgctgcaggttttgaagcgaatattttcgtagaaagcaatgttttt
gaaggtgtaaaaaatccaatcgatttaatgtcaggttatactgccgttactgctactgat
aacgtatttacaagtgtaacaggaactcaggctggaagtggtactgcttttactccgcct
tactcaatcgtaaaattggctaaaactgcggttaaagctgatgtttccgccaatgcagga
cctactttaggaggaaatgtttgcggctctttttaa
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