Flavobacterium humidisoli: M0M44_15440
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Entry
M0M44_15440 CDS
T08925
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fhu
Flavobacterium humidisoli
Brite
KEGG Orthology (KO) [BR:
fhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fhu03032
]
M0M44_15440
03400 DNA repair and recombination proteins [BR:
fhu03400
]
M0M44_15440
Enzymes [BR:
fhu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
M0M44_15440
DNA replication proteins [BR:
fhu03032
]
Prokaryotic type
DNA Topoisomerases
M0M44_15440
DNA repair and recombination proteins [BR:
fhu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
M0M44_15440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Msg2_C
DUF6782
Motif
Other DBs
NCBI-ProteinID:
UPZ14148
LinkDB
All DBs
Position
3583132..3584229
Genome browser
AA seq
365 aa
AA seq
DB search
MNATAKKEILMNQLIKAPHLVIEKLDLEYINDYQLTIVRCREGENFVYKKNGKNVKSKHE
IKRINSLVLPPAWENVRITDITNGHLQAVGTDLKNRKQYRYHPKWNLLRNQTKFYKIAEF
GSKLPAIRKQVDLDLEQKEWSKEKVTALVIRLMEETHIRIGNEKYAKDNKSYGLSTLRKR
HININKNSLRFEFVGKKGKQHTITTRNKQLIKLVSRCEEIPGWEVFKYYDKNGEKKVLDS
HMVNEYLHNISGEYFSAKDFRTWAASIIFFESLMEMGVTSDEKEIKQNIISAFDLTAEAL
GNTRKVCKDYYVHPLLISTYEDGSIQEYFDRVKKSRSTKKYFTKTESAFSELIKNYEINL
EASCQ
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccacagccaaaaaagaaatcttaatgaatcagctgataaaagcaccacattta
gtaattgaaaaactagatttggaatacattaatgattatcaattgacaattgtgcgctgt
cgcgaaggggaaaatttcgtttataaaaagaacggaaagaatgtaaaaagcaaacatgaa
attaaacgcattaatagtctcgtacttccgccagcttgggaaaatgttcgtatcaccgac
attacaaatggacatttacaagccgtaggaaccgatcttaaaaataggaaacaataccgt
tatcatccaaaatggaatttgcttcgaaatcagaccaagttttataaaattgctgaattt
ggatctaaactcccagctattagaaagcaagttgatcttgatctagagcagaaagaatgg
tctaaagaaaaagtaactgctttggtcattcgattaatggaagaaacgcatattcgaatt
ggaaatgagaaatatgccaaagacaacaaatcgtatggactttcgactcttagaaaacgt
catattaatatcaataagaattcgcttcgatttgaatttgttggcaaaaaaggaaaacag
cataccattacgacccgaaacaaacaattgataaaactggtaagccgttgcgaagaaatt
ccaggctgggaagtttttaaatactatgataaaaatggcgagaaaaaagtattggatagc
catatggtcaatgaatatctgcacaacatatcgggcgaatatttcagcgcgaaagatttc
agaacttgggcagcctctattattttctttgaaagcttgatggaaatgggagtgacttca
gatgaaaaagaaattaaacaaaatatcatatctgcttttgatctgacagctgaagcgcta
ggtaacaccagaaaagtgtgcaaggattattacgttcatccgcttttgatttcgacttat
gaagacggttctattcaggaatattttgatagggtcaaaaaaagcagaagcacgaaaaaa
tattttacaaaaacagaaagtgcattttctgaattgattaaaaattatgaaatcaattta
gaagcatcttgtcaataa
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