Flavobacterium humidisoli: M0M44_17010
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Entry
M0M44_17010 CDS
T08925
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fhu
Flavobacterium humidisoli
Pathway
fhu03420
Nucleotide excision repair
fhu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fhu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M0M44_17010
03430 Mismatch repair
M0M44_17010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fhu03400
]
M0M44_17010
Enzymes [BR:
fhu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M0M44_17010
DNA repair and recombination proteins [BR:
fhu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M0M44_17010
MMR (mismatch excision repair)
Other MMR factors
M0M44_17010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
ResIII
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
UPZ14456
LinkDB
All DBs
Position
3954435..3956771
Genome browser
AA seq
778 aa
AA seq
DB search
MQKYIDQLNEAQRAPVLKKDGPMIIIAGAGSGKTRVLTIRIAYLMAQGIDAFNILSLTFT
NKAAREMKHRISDIVGASEAKNLWMGTFHSIFARILRAESDHLGYPSNFTIYDSQDSARL
ISSIIKEMQLDRDIYKPKQVLGRISNYKNSLITVKAYFNNPELVEADAMAKRPRLGEIYQ
QYVDRCFKAGAMDFDDLLLKTNELLTRFPEVLAKYQDRFRYILVDEYQDTNHSQYLIVRA
LSDRFQNICVVGDDAQSIYAFRGANINNILNFQKDYEGVIMFRLEQNYRSTRNIVEAANT
VMEHNKTKLDKVVWTANEFGPKIKVHRSLTDAEEGRFVASTIFEQKMQNQLHNGAFAILY
RTNAQSRAMEDALRKRDIPYRIYGGLSFYQRKEIKDVLCYLRLVLNPKDEEALVRVINYP
ARGIGDTTVEKLTIAANHYKRSIWEVMVNIDKIDLKLNAGTKNKLKDFVTMIQSFQVIDQ
NQDAFYITDHVAKKTGLVQELKKDATPEGMAKIQNIEELLNGIKDFTEGQREIDGARGAL
SEFMEDVALATDLDKDTNDDDRVALMTIHLAKGLEFPHVFVVGMEEDLFPSAMSMSTRSE
LEEERRLFYVALTRAEHQAYLTYAQSRYRWGKLTDSEPSRFIEEIDGQFLEYLTPAETNY
RYKSPIDGDIFGDVDKSKLRLAKPVGGTPPKHITDNSPKPDLNIRKLKPVSGNAPSNGNS
NLFDSKLTVGNIVMHERFGKGEVMNLEGVGPDRKAEIKFEVGGIKKLLLRFAKLDVVG
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaatatattgaccagctcaacgaagcgcagagagcgcctgttttaaagaaagac
gggccaatgattattattgctggtgcaggttcgggaaaaacacgtgttttaaccattaga
attgcgtatttgatggctcaaggtattgatgccttcaatattttgtcgcttacttttacc
aataaagcagcccgcgagatgaaacatagaatttcggatattgtgggggctagtgaggca
aagaacctttggatgggaacttttcactctatttttgctcgtattctgcgtgccgaatca
gatcatttggggtatccttcaaattttacaatttatgactctcaggattcggctagattg
atttcttctattataaaagaaatgcagctagatcgtgatatttacaaaccaaaacaagtt
ttaggacgtatatctaattataaaaatagtttaattacggttaaagcttattttaacaat
ccagaattggttgaggccgatgcaatggcaaaaaggccaagattgggagagatttatcag
cagtatgttgatcgctgttttaaggctggtgcaatggattttgatgatttattgttgaaa
accaatgagctcttaacgcgtttccctgaagttttagcaaagtaccaagatcgtttccgt
tatattttggttgatgagtaccaagatacgaatcactctcaatatctgattgttagagct
ttgtcggatagatttcagaatatttgtgtggtgggagatgatgcgcagagtatttatgcc
ttccgtggtgcgaatatcaataacattctgaatttccaaaaagattacgaaggtgtaatt
atgttccgtttagagcagaattaccgttcgacaagaaacattgtagaagcggcaaatacc
gtgatggaacataataaaaccaaactagataaagtagtttggacagcaaacgagtttgga
ccaaagattaaagttcatagaagtttgactgatgcagaagaaggtcgttttgtagcaagc
acgatttttgaacagaaaatgcaaaatcaattgcataatggtgcttttgcaattttgtat
cgtaccaatgctcagtcgcgcgcgatggaagatgctttgagaaaacgtgacattccgtat
agaatttatggtggtttatctttttatcaacgtaaagagattaaagacgttttatgttat
ttgcgtctggttctaaatccaaaagacgaagaagctttggttcgtgtaatcaattatcca
gcacgtggaattggagacacaacagttgaaaaattaactattgctgccaatcattacaaa
cgttcgatttgggaagtaatggtaaatattgataaaattgatttaaaattgaatgctgga
acaaagaacaaattgaaagattttgttactatgatccagagttttcaggttatcgatcag
aaccaagatgctttttatattacagaccacgttgcaaagaaaaccggattagttcaggaa
ttgaagaaagatgctactccagaggggatggcgaaaattcagaacatcgaagagctttta
aacggtattaaagattttaccgaagggcaaagagaaattgacggagcaagaggtgcgctt
tctgagtttatggaagatgtagctttggcaacagatttggataaagatacaaacgatgat
gatcgtgttgctttgatgaccattcacttagcaaaaggactggagtttccgcatgtattt
gtggtaggaatggaagaagatttgtttccaagcgctatgagtatgagtacgagaagtgaa
ttggaagaagagcgccgtttattctatgtggcattaacccgtgcagaacatcaagcgtat
ttgacctatgctcagtctcgttatcgatggggaaaactaacggatagtgaaccttctcgt
tttattgaagaaattgatggtcagtttttggaatatttgactccagccgaaacaaattat
cgttataagtctccaattgatggcgatatttttggagatgtagataaatcaaaattgcga
ttggcaaaaccagtaggaggaactccgcccaaacatattacagacaacagtccgaagcct
gatttaaatattagaaaactaaaaccagtttcgggaaatgcgccaagtaatggaaattcg
aatttatttgatagtaaattgaccgtaggaaatattgtcatgcatgaacgttttggaaag
ggagaagtgatgaatttagaaggtgttggtccagatagaaaagcagaaattaaatttgaa
gtaggaggaattaagaaattgttgttaagatttgctaaattagatgtcgtaggataa
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