Flavobacterium humidisoli: M0M44_17610
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Entry
M0M44_17610 CDS
T08925
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
fhu
Flavobacterium humidisoli
Pathway
fhu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fhu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M0M44_17610 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fhu03019
]
M0M44_17610 (recQ)
03400 DNA repair and recombination proteins [BR:
fhu03400
]
M0M44_17610 (recQ)
Enzymes [BR:
fhu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M0M44_17610 (recQ)
Messenger RNA biogenesis [BR:
fhu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
M0M44_17610 (recQ)
DNA repair and recombination proteins [BR:
fhu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
M0M44_17610 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
HTH_40
RQC
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
HEM4
zf-CXXC
GerE
Toprim_3
Cys_rich_CPXG
DUF6115
Motif
Other DBs
NCBI-ProteinID:
UPZ14574
LinkDB
All DBs
Position
4077362..4079476
Genome browser
AA seq
704 aa
AA seq
DB search
MTSEILHTTLKENFGFEKFRPNQETIINTILSGQDTLAIMPTGGGKSICFQLPALILPGI
TIVISPLIALMKDQVDSLKTNGISACFINSSQSSQEQKYYIDNLKTNHFKLVYIAPESLS
YLDMAFNELNISLIAIDEAHCISSWGHDFRPAYTNLGYLKSRFPSTPILALTATADKATR
TDISKQLNLQNPKTFIASFDRANLSLEVRPALDRVKQIIDFIENKPNESGIIYCLSRKTT
EELAEKLKKNGIEAKAYHAGLDNETRAKTQDQFINDDCQVVCATIAFGMGIDKSNVRWVI
HYNLPKNIEGYYQEIGRAGRDGLPAETVLFESYADVIQLQKFASEGLNSDIQLAKLDRMK
QYADAVSCRRKILLSYFGELVKENCGNCDICKNPPTFFDGTILAQKALSAIVRLKESEPL
AVIVDFLRGSRNAYIYEKNYQELKTYGIGADVSWYDWNQYLIQLINLGYCEIAFHQHNKI
LLTPFAKKVLFEGEKVKLTTVVKKVIDKNEAKEAKPKAAKNSLFETLRKLRYEIAQEEEV
PAYVIFSDASLRQMEVLRPMTDEDFLAVEGVGKAKLEKYGTDFINAIIEFHRNKSVVKKE
KKENTYKKTLELFQTGLSVDEIAGQRNLGETTIISHLAKLYVDGNDIDLSQFVSEDEIIQ
IEKAQIELENPNALRPYFEYFEEKMSYDKIRFGLAFLERKHQTA
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgacttcagaaattttacataccacactaaaagaaaattttggtttcgaaaagttcaga
cccaatcaagaaaccataattaataccatattatccggacaagacaccttggcaattatg
cctactggaggcgggaaatcaatatgttttcagcttccagctttaattctaccaggaata
actattgtcatatcgcctttgattgctttaatgaaagatcaggttgatagtctaaaaacc
aacggaatttctgcttgctttattaatagcagtcaatcttctcaagagcagaaatattat
attgataatttaaaaacaaatcattttaagttagtttatatcgcgcctgaaagtctttct
tatttagatatggctttcaatgaattgaatattagtctcatagcaatagatgaagcacat
tgcatttcgtcttggggtcatgatttcagaccggcttacactaatttaggttatttaaaa
agccgcttcccttctactccaattttagcattgactgcgacagcagacaaagcaacacga
acagatatatctaaacaattaaatctccagaatccaaagacatttattgcttctttcgat
cgcgcaaatttaagcttggaagttcgtcctgctttggatcgtgttaagcaaataatcgat
tttatcgaaaacaaacccaatgaatctggaataatttattgcttaagtcgcaaaactaca
gaagaacttgctgaaaaacttaaaaaaaacggaattgaagctaaagcatatcatgcgggc
ttagataatgaaacacgagccaaaactcaggatcaatttattaatgatgattgtcaggta
gtttgtgctaccattgctttcgggatgggaattgacaaatcaaatgttcgctgggtaatt
cattacaatcttccaaaaaatatagaaggatattaccaagaaattggccgtgcgggccga
gatggtttgccagctgaaaccgttttgtttgaaagttacgccgatgtaattcaattgcag
aaattcgcatctgaaggattgaactctgatattcaattggcaaaattagatcgtatgaaa
caatatgccgatgctgtaagttgtcgcagaaaaattctactttcttattttggtgaattg
gtaaaagagaattgcggaaactgcgatatttgcaaaaatccgccaactttttttgatggg
acgattctcgcgcaaaaagctttgtctgcaattgtacgattgaaagaatctgagcctcta
gcggtaattgtggattttttgagaggctcgagaaatgcctatatctatgaaaaaaattat
caagagctaaaaacgtacggaattggtgctgatgtttcttggtacgattggaatcaatat
cttatccagcttatcaatttaggatattgcgaaattgcttttcaccagcataataaaatt
ttgcttaccccttttgcgaagaaagttttatttgagggagaaaaagtaaaactgactacg
gttgtcaaaaaagtaattgataaaaacgaagccaaggaagcaaaaccaaaagctgctaaa
aattctctttttgaaacgcttagaaaactacgctacgaaattgctcaagaagaagaagtt
cctgcttatgttatttttagcgatgcttcattgagacaaatggaagttttaagaccaatg
actgacgaagatttccttgctgttgaaggtgttggtaaagccaaacttgaaaaatacgga
actgattttataaatgctataattgaatttcatcgaaataaatcggttgtaaaaaaagag
aaaaaagagaatacttataaaaaaacattagaattatttcaaaccggactttcagtagat
gaaattgctgggcaacgaaatttaggtgaaactacaatcatttctcatttggctaaatta
tacgttgacggcaatgatatagatttaagtcagtttgtttcggaagatgaaattattcaa
attgaaaaagctcagatagaactagaaaatccaaatgcattaagaccttactttgaatat
tttgaagaaaaaatgtcttatgataaaattcgatttggattggcttttttggaaagaaaa
catcaaacggcataa
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