KEGG   Flavobacterium humidisoli: M0M44_18225
Entry
M0M44_18225       CDS       T08925                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
fhu  Flavobacterium humidisoli
Brite
KEGG Orthology (KO) [BR:fhu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fhu03400]
    M0M44_18225
Enzymes [BR:fhu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     M0M44_18225
    5.6.2.6  RNA 3'-5' helicase
     M0M44_18225
DNA repair and recombination proteins [BR:fhu03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    M0M44_18225
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: UPZ14690
LinkDB
Position
4210368..4212827
AA seq 819 aa
MNREQLFIIANEWFESQGWKPFPFQTQTWTAFLQGKNGLLNAPTGSGKTYALWLPIILNY
IKENPNYKTKHTSGLKAIWITPLRSLSVEIKQAAERVLTDLDIPMTVGIRSGDTSSAERA
KQKNKMPDLLITTPESLQLLLATKGYTNIFKNCSSIVIDEWHELLGTKRGVQVELGLSRL
KTIAKNIRIWGISATIGNLQQAQEVLLGVNSEAYHNSVLIKAVINKKIKVVSIIPEKMDT
YPWRGHMGLHLIDEAAKIIKASKTTLIFTNVRSACEIWYQRLLEKYPEFAGEMAMHHGSI
DRETRLWVENAIRNEELKVVVCTSSLDLGVDFAPVESIIQVGGPKGVARFMQRAGRSGHQ
PGKESVIYFLATHAIELIEASALKKAVENSVIEDRVPYLNSWDVLVQYLNTLAVSDGFYP
NEIFKEIQGTFSYQTITAENWNWILNFITQGSQSLHAYDEFKKVEIDENGCYKINSRMIA
MHHRMQIGTIVGDAVMNVKYLSGGYIGTIEEWFISKLKPGDTFIFAGKKLELFKIRNMQV
LVKKASAKKESKIASWMGGRLALSSQMSELLRKELYRANTDNLSPELKALQPLFKRQRKE
SIVPSSDEFLIETFKTREGFHAIFYPFEGRFVHEALASLLAFRISLLQSITFSLAYNDYG
FELVSDQEIDIEAVLDNNLFSTEYVHHDLQKSLNSTEMARRKFRDIAVISGLVFTGFPGK
MVKTKHLQSGSQLLFEVFRDFEPDNLLLHQAYRETFEHQLEEGRLILALERIANQKIIWK
QCLKPTPFSFPIITDRLREKLSSETLAERIQKMTASYMK
NT seq 2460 nt   +upstreamnt  +downstreamnt
atgaatagagagcagttatttataatcgccaacgaatggtttgagagtcagggatggaaa
ccttttccgtttcagactcaaacatggactgcatttttacagggcaaaaatggcttgcta
aatgctccgacaggaagcggaaaaacctatgctctttggcttcccatcattttaaactac
atcaaagaaaatccaaactataaaactaaacatacctcaggattaaaagccatttggatt
acgcctttacgatctttatctgttgaaatcaaacaagccgcagaacgagttttaacagat
ttagacattccaatgacagtgggaattcgttcaggagatacatcttctgcagaacgtgcc
aagcaaaaaaacaaaatgcccgatttgctgattacaactcccgaaagtctgcaactactt
ttggcaacaaaaggttatacgaatatttttaaaaattgcagttcaatcgtaattgacgaa
tggcacgaattgctgggaaccaagcgtggcgtgcaagtagaattaggtttatcgagatta
aaaactatcgctaaaaatatacgtatttggggaatctcagccacaattggcaatttacag
caggcgcaggaagtcttacttggagtaaattctgaagcgtaccataattctgttttaatc
aaagcagtaattaacaagaaaataaaagtggtgtctataattccagagaaaatggataca
tatccgtggcgcggacacatgggactgcatctgattgatgaagcggcaaaaattataaaa
gccagtaaaacgacgcttattttcacgaatgttcgttcggcatgcgaaatctggtatcag
agattattagaaaaatatcctgaatttgcaggcgaaatggcaatgcatcacggaagcatt
gacagagaaaccagactttgggttgaaaatgccattcgaaatgaagaattaaaagtcgtt
gtctgcacttctagtttagatttaggggttgactttgctcctgtcgaatcgatcattcag
gttggaggtccaaaaggtgtagcacgttttatgcaacgtgcaggacgaagcgggcatcag
cctggaaaagaaagcgttatttattttcttgccactcatgccatcgaattaatcgaagct
tctgcgttgaaaaaagcggttgaaaacagtgtgatagaagaccgtgttccgtacttaaat
agttgggatgtattggttcaatacctcaatactctggcagtttctgatggattttatcca
aatgaaattttcaaagaaattcaaggaacctttagttatcaaaccattacggctgaaaac
tggaactggattttaaattttattacacaaggaagccaaagtcttcatgcatatgacgaa
tttaaaaaagttgaaattgacgaaaatggctgctacaaaataaacagcagaatgattgcc
atgcatcatagaatgcaaattggaaccattgttggcgatgccgttatgaatgtgaaatat
ctcagcggtggttatattggtacaattgaagaatggtttatttcgaaattgaaacctggt
gatacttttattttcgcaggaaaaaaactcgaactgttcaaaatcagaaatatgcaggtc
ttggtaaaaaaagccagtgcgaagaaagaatctaaaattgcgagctggatgggcggacgt
ttggctctttcttctcaaatgagcgaattgcttcgaaaagaattatatcgtgctaatacc
gacaatctttcaccagaattaaaagccttacagcctttatttaaaagacagagaaaagaa
tcaatcgttccaagttcagatgaatttttaattgaaactttcaaaactcgagaaggattt
catgcgattttttatccttttgagggacgctttgttcatgaagctttagccagtttattg
gcatttagaattagtttactacaatcaatcacattttctttagcctataacgattatggt
tttgaattggtttcggatcaggaaattgatatcgaagcggttttagacaataacctattt
tcaaccgaatacgtgcatcacgatttgcagaaaagtttaaattcaaccgaaatggcgcga
agaaagtttagagatattgccgttatatcaggattagtttttaccggttttccaggaaaa
atggttaagactaaacatttgcaaagcggttcgcaattgctttttgaagtatttagagat
ttcgaacctgataatttattgctgcatcaagcctaccgtgaaacttttgaacatcagtta
gaagaaggacgtttgattttggcattggaacgaatcgcaaatcaaaaaataatctggaaa
caatgtttgaaaccgactccttttagttttccaattattaccgatcgattgagagaaaag
ctttcaagcgaaactctagctgaaagaatccaaaaaatgacggcatcttatatgaaataa

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