Fusobacterium hwasookii: RN87_01040
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Entry
RN87_01040 CDS
T04183
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
fhw
Fusobacterium hwasookii
Pathway
fhw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fhw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RN87_01040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fhw03019
]
RN87_01040
03016 Transfer RNA biogenesis [BR:
fhw03016
]
RN87_01040
Enzymes [BR:
fhw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
RN87_01040
Messenger RNA biogenesis [BR:
fhw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RN87_01040
Transfer RNA biogenesis [BR:
fhw03016
]
Prokaryotic type
tRNA degradation factors
RN87_01040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
S1_RRP5
KH_2
SAC3
UvrC_RNaseH
Motif
Other DBs
NCBI-ProteinID:
ALQ39185
UniProt:
A0A0S2ZK51
LinkDB
All DBs
Position
212458..214557
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AA seq
699 aa
AA seq
DB search
MFDEKIMELELAGRTLKVSTGKISRQSAGAIVIQYGDTVLLSTANRSKEARKGADFFPLT
VDYIEKFYSTGKFPGGFNKREGRPSTNATLVARLIDRPIRPMFPDGFNYDVHIVNTVLSY
DEINMPDYLGVIGSSLALMISDIPFLGPVASVIVGYKNGEFILNPSPAELEESELDLIVA
GTKDAVNMVEAGAKELDEETMLKAIMFAHENIKKICEFQEEFSKLYGKENIEFEKPEVLP
LVKNFIDTNGHERLQQAVLTTGKKNREEAVDSLEEELMEKFIQENYPDVPEEELPEDVIL
EFKTYYHDLMKKLVREAILYHKHRVDGRTTTEIRPLDAQINVLPVPHGSALFTRGETQSL
AITTLGTKEDEQLIDDLEKEYYKKFYLHYNFPPYSVGEVGRMGSPGRRELGHGSLAERAL
SYVIPSEEEFPYTIRVVSEITESNGSSSQASICGGSLSLMSAGVPIKEHVAGIAMGLIKE
GEEFTVLTDIMGLEDHLGDMDFKVAGTKSGITALQMDIKITGITEEIMRIALNQAHQARI
QILEVMNNTISKPAELKSNVPRIQQITIPKDKIAVLIGPGGKNIKSIIEQTGATVDITDD
GLVSVFAKDADTLEKTLKLVDSFVREVEYNEVYEGRVVSIMKFGAFMEILPGKEGLLHIS
EISPERVEKVEDVLSVGDVFNVRVISMEGGKISLSKKKV
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatgaaaaaattatggagctagaacttgctggaagaactctaaaagtttcaact
ggtaaaatttctagacaatctgctggagctattgtaattcaatatggagatacagttctt
ctatctactgctaaccgtagtaaagaagctagaaaaggtgcagactttttcccattaact
gttgactatatagaaaaattttattcaactggtaaattcccaggaggatttaataaaaga
gaaggaagaccttcaacaaatgctacattggtagcaagacttattgacagaccaataaga
ccaatgtttccagatggttttaactatgatgtacatatagttaatactgtcctatcttat
gatgaaataaatatgcctgattatttgggtgtaattggttcatctcttgcacttatgatt
tctgatatcccattcttaggacctgttgcaagtgtaatagttggatataaaaatggagaa
tttattttaaatccttctcctgctgaattagaagaaagtgaacttgatttaatagttgca
ggaacaaaagatgctgtaaacatggttgaagcaggagcaaaagaattagatgaagaaact
atgttaaaggcaattatgtttgcacatgaaaatattaaaaagatttgtgaattccaagaa
gaattttctaaattatatggaaaagaaaatatagaatttgaaaaaccagaagtattacct
cttgttaaaaatttcatagatactaatggacatgaaagattacaacaagctgttttaact
actggtaagaaaaatagagaagaagctgttgattcattagaagaagaattgatggaaaaa
ttcatacaagaaaactatcctgatgttcctgaagaagaattaccagaagatgtaatatta
gaatttaaaacttactatcatgatttaatgaaaaaattagttagagaagctattttatat
cataagcatagagttgatggaagaacaacaactgaaataagaccattagatgctcaaata
aatgtattacctgttcctcatggttcagcattatttacaagaggagaaactcaatctctt
gcaatcacaacattaggaactaaggaagatgagcaactaatagatgatttagaaaaagaa
tattataaaaaattctatctacactataacttccctccatactcagttggagaagttgga
agaatgggttcacctggaagaagagaattaggacatggttcacttgcagaaagagcttta
agttatgttattcccagtgaagaagaatttccttacactataagagttgtatctgaaatc
actgaatctaatggttcatcttcacaagcttctatctgtggaggttcattatcacttatg
tcagctggtgttcctataaaagaacatgttgctggtatagcaatggggcttattaaagaa
ggagaagaatttacagttctaacagatataatgggacttgaagaccacttaggagatatg
gactttaaagttgctggtacaaaatctggaattacagctttacaaatggatattaaaatt
acaggtataactgaagaaattatgagaattgctttaaatcaagctcatcaagctagaatt
caaatactagaagtgatgaataatacaatttctaaacctgctgaattaaaatctaatgta
cctagaatacaacaaattactattccaaaagataagattgcagttcttattggaccaggt
ggaaaaaatattaaaagtatcatagaacaaacaggagctacagttgatataacagatgat
ggacttgtatctgtttttgcaaaagatgctgatacattagaaaaaactttaaaacttgta
gattcttttgtaagagaagttgaatacaatgaagtttatgaaggacgtgtagtttctata
atgaaatttggtgcatttatggaaattttacctggtaaagaaggtttactacatatttct
gaaatttcaccagaaagagttgaaaaagttgaagatgtactttcagttggagatgtattt
aatgtaagagttatttctatggaaggtggaaaaatctctttaagtaaaaagaaggtttaa
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