Fusobacterium hwasookii: RN87_02620
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Entry
RN87_02620 CDS
T04183
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
fhw
Fusobacterium hwasookii
Pathway
fhw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fhw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RN87_02620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fhw03021
]
RN87_02620
03400 DNA repair and recombination proteins [BR:
fhw03400
]
RN87_02620
Enzymes [BR:
fhw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RN87_02620
Transcription machinery [BR:
fhw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RN87_02620
DNA repair and recombination proteins [BR:
fhw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RN87_02620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Apocytochr_F_C
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
ALQ39483
UniProt:
A0A0S2ZKP2
LinkDB
All DBs
Position
564679..568641
Genome browser
AA seq
1320 aa
AA seq
DB search
MGIRSFEKIRIKLASPEKILEWSHGEVTKPETINYRTLNPERDGLFCEVIFGPTKDWECS
CGKYKRMRYKGLVCEKCGVEVTRAKVRRERMGHITLASPVSHIWYSKGSPNKMSLIIGIS
SKELESVLYFARYIVTSSQEETVTVGKILTEKEYKLLKQLYGNRFEAYMGADGILKLLSA
IDLEKLRDELENELLDANSAQKRKKLVKRLKIVRDFIASGNRPEWMILTNVPVIPAELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKKLLEIKAPEIVVKNEKRMLQEAVDALIDNGR
RGKPVVAQNNRELKSLSDMLKGKQGRFRQNLLGKRVDYSARSVIVVGPSLKMNQCGIPKK
MALELYKPFIMRELVRRELANNIKMAKKLVEESDDKVWSVIEDVIADHPVLLNRAPTLHR
LSIQAFQPVLIEGKAIRLHPLVCSAFNADFDGDQMAVHLTLSPESMMEAKLLMFAPNNII
SPSSGEPIAVPSQDMVMGCYYMTKERAGEKGEGKLFSNIEQVITAYQNDKVGTHALIKVR
INGELVETTPGRVLFNEILPEIDRNYGMTYGKGKIKALIKSLYEKHGFTETAELINRIKN
FGYHYGTFAGVSVGIEDLEVPPQKKDLLNKADKEVTQIEKDYKSGKIINEERYRKTIEVW
SRTTEAVTKAMMKNLDEFNPVYMMATSGARGNVSQMRQLAGMRGNMADTQGRTIEVPIKA
NFREGLTVLEFFMSSHGARKGLADTALRTADSGYLTRRLVDISHEVIVNEEDCHTHEGIE
VEALVGANGEVIEELRERINGRVLAEDLIHKGKKIAKRNTMIHKDLLDKIEQLGIKKVKI
RSPLTCALEKGVCQKCYGMDLSNYNEILLGEAVGVVAAQSIGEPGTQLTMRTFHTGGVAG
AATVVNSKKAENDGEVSFRDIKTIEINGEDVVVSQGGKIIIADNEHEVDSGSVIRVKEGQ
EVKEGDVLVTFDPYHIPIISSHDGKVQYRHFTPKNIRDEKYDVHEYLVVRSVDSVESEPR
VHVLDKKNEKLATYNIPYGAYMMVRDGAKVKKGDIIAKIIKLGEGTKDITGGLPRVQELF
EARNPKGKATLAEIDGRIEVLPTKKKQMRVVNVRSLENPEEYKEYLIPMGERLVVTDGLK
IKAGDKITEGAISPYDVLSIKGLVAAEQYILESVQQVYRDQGVTVNDKHIEIIVKQMFRK
VKIVDSGASLFLEDEVIEKRVVDLENKKLEEEGKALIKYEPVIQGITKAAVNTGSFISAA
SFQETTKVLSNAAIEGKVDYLEGLKENVILGKKIPAGTGFNKYKAIKVKYSSDEEKAEEE
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
atgggaataagaagttttgaaaaaattagaataaaattagcatctcctgaaaaaatatta
gaatggtctcatggagaagttacaaaacctgagactataaactatagaacacttaatcct
gaaagggatggattattctgtgaagtaatatttggaccaacaaaagattgggaatgttct
tgtggaaaatataagagaatgagatataaaggcttagtttgtgaaaaatgtggagttgaa
gtaacaagagctaaagttagaagagaaagaatgggacatataactttagcatctcctgtt
tctcatatttggtattctaaaggaagtccaaataaaatgtctttaatcattggtatctca
tctaaagaattggaatctgttctatattttgctagatacatagtaacttctagccaagaa
gaaacagttacagttggaaaaatattaacagaaaaagaatataaactattaaaacaatta
tatggcaatagatttgaagcatacatgggagcagatgggatattaaagcttctttcagct
attgacttagaaaaattaagagatgaactagaaaatgaattactagatgctaattcagct
caaaaaagaaaaaaacttgtaaaaagattaaaaatagttagagattttatagcttctgga
aatagacctgaatggatgatacttacaaatgttcctgtaattccagcagaacttagacca
atggttcaacttgatggaggaagatttgcaacatctgacttaaatgatttatacagaaga
gttataaatagaaataacagacttaaaaaactattagaaataaaagcacctgaaattgtt
gtaaaaaatgaaaaaagaatgcttcaagaagcagtagatgctcttattgataatggtaga
agaggtaaaccagtagttgctcaaaataatagagaattaaaatctttatctgatatgtta
aaaggaaaacaaggaagattcagacaaaacttactaggaaaaagagttgactattcagca
agatcggttatagttgtaggaccatctttaaagatgaaccaatgtggtatacctaagaaa
atggctcttgaattatataaaccatttataatgagagagttagtaagaagagaattagct
aataacattaaaatggctaaaaaattagttgaagaatctgatgataaagtttggtcagta
atagaagatgttatagctgatcaccctgtacttttaaacagagcccctacattacacaga
ctatcaatacaagccttccaacctgtattgatagaaggtaaagcaataagattacatcct
cttgtttgttctgccttcaatgctgactttgatggggaccaaatggcagtacatttaact
ttatcgcctgaatcaatgatggaagctaaacttttaatgtttgctcctaataatattatt
tctccatctagtggagaacctattgctgttccatctcaagatatggtaatgggttgctat
tatatgactaaagaaagagctggagaaaaaggagaaggaaaattattctctaatatagaa
caagtaataactgcatatcaaaatgataaagtgggaacacatgctctaataaaagttaga
ataaatggagaattagttgaaacaactcctggaagagttttatttaatgaaattttacca
gaaatagatagaaattatggaatgacttatggtaaaggaaaaataaaggctttaattaaa
tcattatatgaaaaacatggatttactgaaacagcagaacttattaacagaataaagaac
tttggataccactatggtacttttgcaggagtttctgttggaattgaagacttagaagtt
ccaccacaaaagaaagatttattgaataaagcagataaagaagttactcaaatagaaaaa
gattataaatctggaaaaattataaatgaagaaagatatagaaaaacaatagaagtttgg
tcaagaactactgaggcagttactaaggcaatgatgaaaaacttggatgaattcaaccca
gtttatatgatggcaacatcaggagccagaggtaatgtaagccaaatgagacaattagct
ggaatgagaggaaacatggcggatacacaaggtagaaccatagaagttcctataaaagct
aactttagagaaggactaacagtattggaattctttatgtcttcacatggagccagaaaa
gggctagctgatacagcactaagaactgccgattcaggatacttaacaagaagacttgtt
gatatttctcatgaagttatagtaaatgaagaagattgccatactcatgaaggaatagaa
gttgaagctcttgttggtgctaatggtgaagtaattgaagagttaagagaaagaattaat
ggtagagttttagcagaagaccttatacataaaggaaagaaaattgctaagagaaatact
atgattcataaagatttattagataaaattgaacaattaggaattaaaaaggtaaaaata
agatctcctttaacttgtgcactagaaaagggagtttgtcaaaaatgttatggtatggac
ctatcaaactataatgaaatcttactaggggaagctgttggagtagttgctgctcaatca
ataggggaacctggtactcagcttacaatgagaacattccatacaggaggggttgcagga
gcagctactgttgtaaattctaaaaaagctgaaaatgatggggaagtatcatttagagat
ataaaaactattgaaatcaatggtgaagatgttgttgttagccaaggtggaaaaatcatt
atagcagacaatgaacatgaagttgactcaggatcagtaataagagttaaagagggacaa
gaggtaaaagaaggagatgtacttgttacatttgacccttaccatattcctataatttca
tctcatgatggaaaagtacaatatagacattttactcctaaaaatataagagatgaaaag
tatgatgttcatgaatatctagttgtaagatctgttgatagtgttgaatcagagccaaga
gtacatgtattagataagaagaatgaaaaattagctacttacaatattccttatggagca
tatatgatggtaagagatggggccaaagttaaaaaaggtgacatcatagctaagatcatc
aaattaggagaaggtactaaggatatcactggtggtcttccaagagtacaagaattattt
gaagcaagaaatccaaaaggaaaagcaacacttgctgaaatagatggaagaatagaagtt
ttaccaacaaagaaaaaacaaatgcgtgttgttaatgttagatctttagaaaatccagaa
gaatataaagaatatctaattcctatgggagaacgtttagttgttactgatggattaaag
ataaaagctggagataagataacagaaggagctatttctccttatgatgtactaagtatt
aaagggcttgtagcagctgaacaatatatacttgaatctgtacaacaagtttatagagat
caaggggttacagttaatgataaacatatagaaattatcgttaaacaaatgtttagaaaa
gttaaaatagttgactctggagcatctttattccttgaagatgaagttatagaaaagaga
gttgtagatcttgaaaacaagaaattggaagaagaaggaaaagcacttattaaatatgaa
ccagttatacaaggtatcacaaaagcggctgtaaatacaggaagctttatatctgctgct
tcattccaagaaacaacaaaagttttatcaaatgctgctattgaaggaaaagttgactac
ctagaaggattaaaagaaaatgtaattttaggtaagaagattccagcaggaacaggattt
aataaatataaagctataaaagtaaaatatagtagtgatgaagaaaaagcagaagaagaa
taa
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