Fusobacterium hwasookii: RN87_05870
Help
Entry
RN87_05870 CDS
T04183
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
fhw
Fusobacterium hwasookii
Pathway
fhw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fhw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RN87_05870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fhw03019
]
RN87_05870
03400 DNA repair and recombination proteins [BR:
fhw03400
]
RN87_05870
Enzymes [BR:
fhw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RN87_05870
Messenger RNA biogenesis [BR:
fhw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RN87_05870
DNA repair and recombination proteins [BR:
fhw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RN87_05870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ALQ40056
UniProt:
A0A0S2ZME6
LinkDB
All DBs
Position
1280091..1281911
Genome browser
AA seq
606 aa
AA seq
DB search
MKAEALRILKEYYGYDNFREGQEKIIDAILQKRNVLGIMTTGAGKSICYQIPALIFEGLT
IIISPLISLMKDQVDSLRLIGIEASYLNSTLDNDEYNKILFKIKRGKIKLLYISPERLEN
KFFLNFIKTIKISMVVVDEAHCVSQWGENFRRSYLRIADFVKYITGKSQIQTLAFTATAT
PKIKVDIIEKLNIVDPFIYVDYFNRDNIYFKVVDNSGFDKELDIDSKPFIIDYLRKHKGK
SGIIYCSTRKNVDDIYSYLLGFERSVTKYHGGMSKEERDKNQKLFLDDDVEIMVATNAFG
MGINKSNIRYVIHANIPADLESYYQEAGRAGRDGGPAEAILVYNEKDRDIQRYLMEKEAE
GKKDKNYLNKRLKNFNKMLEYTELKTCYREYILKYFGEKMIRNYCGYCENCKKEKNIKDF
SLEAKKIISGVGRAKESLGISTLANMLMGKADTKMLNKGLDKISTFGIMREDKQEWIESF
INYMISEKYLIQSAGSFPVLKLGKKYKDILNGNIKIIRKEDEKIDFDYYENNLFKELNSL
RKEISKEENIAPYIIFSDMTLIEMAEKKPRNRWDMLKIKGIGNQKYKSYGEKFLERINNY
CMEEKL
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagcagaagcactcagaattttaaaagaatattacggttatgataatttcagagaa
ggacaagaaaaaataatagatgctatcttgcaaaaaagaaatgttttaggaataatgaca
acgggggctggaaaatctatctgttatcaaatacctgctttgatctttgaagggctaact
ataataatttctcctctaatatctttaatgaaagaccaagtagatagtttgaggttgatt
ggaatagaagcaagttatttaaactcaactttagataatgatgaatacaataagatactt
tttaaaataaaaagaggaaagataaaattattatatatctcacctgaaagattagaaaat
aaatttttcttaaactttataaaaaccataaaaatttctatggtagtagtagatgaagca
cattgtgtatcccagtggggggaaaattttagaagaagttatctaaggatagcagatttt
gtgaaatatataacaggaaaaagccaaattcaaactttggcttttactgctactgcaacc
cctaaaattaaagtggatataatagaaaaattaaatatagttgatccttttatctatgta
gattactttaatagagataatatttattttaaagttgtagataatagcgggtttgataaa
gaattagatatagattccaagccttttataatagattatttaagaaaacataaaggaaaa
tcaggaataatttattgctcaactagaaaaaatgtagatgacatttatagctatttgcta
ggatttgagagaagtgttacaaagtatcatggtggaatgtctaaggaagaaagagataaa
aatcaaaaattattcttagatgatgatgttgaaataatggttgcaactaatgcctttggt
atggggataaataaatctaatataagatatgtaatacatgcaaatattccagctgattta
gaaagttattatcaagaagcaggtagagcaggaagagatggtggacctgctgaagctatt
cttgtatataatgaaaaagatagggatattcaaagatatttgatggagaaggaagcagaa
ggaaaaaaagataaaaattatctcaataaaagattaaaaaattttaataaaatgctagaa
tatacagaattaaagacttgttacagagaatatatcttaaagtattttggtgaaaaaatg
ataagaaactattgtggttattgtgagaactgcaaaaaagagaaaaatatcaaagatttt
tcactggaagcaaagaaaattatttcaggtgtaggtagagcaaaagaaagtttaggaata
tctacgctagctaatatgcttatgggaaaagcggatacaaaaatgttaaacaaaggactt
gacaaaatttctacatttgggataatgagagaagataagcaggagtggatagaaagtttt
ataaattatatgatttctgaaaaatatcttatacagagtgcaggaagttttcctgtttta
aaacttgggaagaaatataaagatattttaaatggaaatataaaaataataagaaaagaa
gatgagaaaattgactttgattattatgaaaataatttatttaaagaattaaattctctc
agaaaggagatttcaaaagaagaaaatattgcaccttatattattttttctgatatgact
cttatagagatggcagagaaaaaaccaagaaataggtgggatatgttaaaaataaaaggt
atagggaatcaaaaatacaaaagctatggggaaaaatttttagaaagaattaataattat
tgtatggaggagaaactatga
DBGET
integrated database retrieval system
