Fervidobacterium islandicum: NA23_04475
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Entry
NA23_04475 CDS
T04215
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
fia
Fervidobacterium islandicum
Pathway
fia03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NA23_04475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fia03019
]
NA23_04475
03009 Ribosome biogenesis [BR:
fia03009
]
NA23_04475
Enzymes [BR:
fia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NA23_04475
Messenger RNA biogenesis [BR:
fia03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NA23_04475
Ribosome biogenesis [BR:
fia03009
]
Prokaryotic type
rRNA helicases
NA23_04475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
CMS1
ERCC3_RAD25_C
SLFN-g3_helicase
Utp25_C
UvrD-helicase
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AMW32607
UniProt:
A0AAI8CLH1
LinkDB
All DBs
Position
complement(967357..969006)
Genome browser
AA seq
549 aa
AA seq
DB search
MIRSVEVTQGAEAENGFKGFGLSEETLGAIEKKGYTQPTEIQRLVLPVALKTDKDIIAQA
QTGTGKTAAFAIPLLERIDFRADKSVKALIVTPTRELALQIYEEIKSLKGNRRIKVATVY
GGQSMERQLKDLERGVDIVVGTPGRLLDHINRKTLDLSNVKYLVLDEADRMLDMGFLDDV
LEIIKQTPASKRTFLFSATMPKEIVNIAKKFMREYEHISTVKEELTTENAEQLYFEVEES
DKLPLLCRIIDMNPDFYGIVFCQTKAEVDEISKKLSDLGYNADGLHGDYSQSQRERVLDK
FRKKQLNILVTTDVAARGIDIEGLTHVINYSVPRDPEYYVHRIGRTGRAGKKGFAITFVT
RSDYYHFTRVKRFARAKIVKDKIPMVEDILSRQLEGILSTIRKESHVSNELFREVAQKLI
EEMGPTEAVEMLLHTLLKERVDVSRYGNVKAKDFSKQSQNSSTVRLFVALGSSKGLDKKR
LVEYIAEKTGVEPKDINNVRIFETYSFIDVNEADAEVIMKVLNKNVGKSGRSAKSSKPLV
QRAREKKTN
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgataagaagtgttgaggttacgcaaggtgctgaagcggaaaacggtttcaaaggtttt
ggtttgagtgaagaaacactcggtgcgattgaaaagaaaggttatactcagccaacggag
attcagcggttagtacttcccgtagcgttaaagacagacaaggatattatcgcacaagcg
caaacagggacgggaaagaccgctgcatttgctataccattacttgagcgtatcgacttt
agagcggacaaaagtgtcaaagctctgattgtaacaccgacaagagagttggcgctacag
atatacgaagaaataaaaagcctaaaaggaaatcgacgtatcaaggtggcaaccgtctac
ggtggacaatcaatggaaagacaactcaaagaccttgaaagaggtgtagatatcgttgta
ggtacaccaggtaggttgcttgaccacataaatcgtaagacgcttgatttgtcaaatgta
aaatatctggtcttagatgaagcagatagaatgctcgatatgggatttctggacgatgta
cttgagataattaagcaaactccagcttcgaagagaacttttctgttctcagcaacaatg
ccaaaagagatagtaaatatagcaaaaaagttcatgagagagtacgagcatatatcaact
gttaaggaagagcttacgactgaaaatgccgagcagttgtatttcgaagttgaagaaagt
gacaaattaccacttctatgcagaataatcgacatgaacccagatttttatggaattgtc
ttttgccaaacaaaagcagaagtggatgaaatttcaaagaaactatcagaccttggttac
aatgctgatggattacacggagattattcgcaatctcaaagggaaagggttcttgataag
ttcagaaaaaaacagctcaacatacttgtgaccacggatgttgcggcaaggggaatagat
atagaaggacttacccacgttattaattactccgttcctagggatccagagtattacgtg
cacagaataggtcggacgggaagagcaggtaagaaaggatttgcaatcacattcgtgaca
agaagtgattattaccacttcacgagggtaaagagatttgcaagagctaagattgtgaaa
gacaaaattccaatggttgaggacatactaagtagacaactcgaaggtattctcagcacc
attagaaaagaatcccacgtttctaacgaacttttcagggaagttgctcaaaagctgata
gaagaaatgggaccaacggaagctgtcgaaatgctgctccatactttgttgaaagaaaga
gttgatgtttcacgttacgggaacgtcaaggcaaaagatttctcaaaacagtcacaaaac
agctctactgtaagactatttgtagctcttggttcttctaaggggttagataagaagaga
cttgttgaatacatagccgaaaagaccggtgtagaaccgaaggatataaacaacgtgcga
attttcgagacttattcattcatcgacgttaacgaagctgatgcagaagtcattatgaaa
gtgctgaacaagaacgttggaaaaagtggcaggtctgcaaagtcatctaaacctttggtc
caaagagcacgtgaaaagaaaacaaattaa
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