Fervidobacterium islandicum: NA23_04680
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Entry
NA23_04680 CDS
T04215
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fia
Fervidobacterium islandicum
Pathway
fia03420
Nucleotide excision repair
fia03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NA23_04680
03430 Mismatch repair
NA23_04680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fia03400
]
NA23_04680
Enzymes [BR:
fia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NA23_04680
DNA repair and recombination proteins [BR:
fia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NA23_04680
MMR (mismatch excision repair)
Other MMR factors
NA23_04680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
AAA_11
DEAD
ResIII
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AMW33706
UniProt:
A0AAI8CND8
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All DBs
Position
1006477..1008423
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AA seq
648 aa
AA seq
DB search
MKQDREIKEYKLETRESTGTKIVDEIMNELDAEQRNAVLNSFGKSVVIAGPGSGKTRVIT
YKIAYLLANGVKPSDILLVTFTRAAAREMIERAEKVTKRELSGMLAGTFHHVCNVLLRRY
GSAIGIKSNFTILDEDDSVDLMKFVRSKFVTSKQMSKALPTPNELYSLYSYMNNTLQTPY
EVVVKRAKRWINVIDIIEKIFEEYITEKEKQNVLDYDDLLLKMLRLLEENSDIRQRISSQ
FKWILVDEFQDTNILQLKIVQLLSQVHSNLFVVADDAQSIYSFRGARFENVKEIMDGANV
FKIQTNYRSTDKIVELVNSMIPRSAVPKKLRAVRQSLQKPVVVNTYDHFDEARFIAQRII
EHVNEGANYRDIAVIYRAHSHSLELQLELSKRNIPFRLLSGLRFTETAHAKDVIAFLKIM
ENPYEIISWMRILKMLDNVGDVKAEKIANDITATEDPIGQFLKLNVKSSNIDELKNVIYK
SLGKGPSEQIRNFYEDFYRNILEYHYQDFRDREEDIERLIEMASFYDSTEEFLSELIISE
AREAELDRNEEEGGKVTLTTVHQAKGLEWKIVFVIGVNPGDFPHFLALKDGSIDEEERLF
YVAITRAKDMLYITHSVLSRSDYFKAGKIERDFVEDIPPYLVEYWRVR
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaagacagagaaataaaagagtacaaattggaaactagggagagcacaggcact
aaaattgtagatgagataatgaacgaactcgatgcagaacaacggaatgcggttttgaat
tcttttggtaagagtgttgtcatagccggtccgggtagcgggaaaacacgtgtaataact
tataagatagcgtatttacttgcaaatggagtaaaaccttcggatatattgttagttaca
tttacgcgtgccgcagcaagggaaatgatagagcgcgctgaaaaggttaccaagagagaa
ctttctggaatgcttgctggaacgttccatcacgtttgcaatgtgttgcttagacggtat
ggttcagccataggtataaaatcgaatttcacaattttagatgaagatgactctgttgat
ttgatgaagtttgtaagaagcaagtttgtaacatcaaagcagatgagcaaagcactacct
acgccgaatgaactttattctctctattcctacatgaacaataccctgcaaacaccttac
gaagtcgtagttaaacgcgcaaaaagatggattaatgttatcgatataatagagaaaatt
ttcgaagagtacatcacggaaaaagaaaaacagaacgtactagactacgacgatttatta
cttaagatgctcagacttttggaagaaaactcggatatccgccaacgtatttcatcgcaa
ttcaaatggattcttgttgatgaatttcaggacaccaatatacttcaactgaagattgtt
cagttgctcagtcaggtgcatagcaacctttttgttgttgcagatgatgcacaaagcatt
tattcattcaggggcgcaagatttgagaatgtaaaggaaatcatggacggtgcgaatgtt
ttcaagatccagacgaactacagaagcacggacaaaatcgtcgaattggtgaattcgatg
ataccaaggtcagcggtgccgaaaaagttgagggcagttcgtcaaagccttcaaaaacca
gttgttgtaaacacgtacgaccactttgatgaagcgagattcatcgctcaaaggattata
gaacatgtaaacgaaggagcaaattaccgtgatatagcggttatttacagagcgcattct
cattctttagagttacagcttgaactctcaaaacggaacataccgtttaggttgctttca
ggcttacggttcacagaaaccgcacatgccaaggacgttattgcgtttcttaagattatg
gaaaacccttacgaaatcatctcctggatgaggatattgaagatgctggataacgttggc
gatgtgaaagctgagaaaatcgcaaatgacattacagcaactgaagatcctataggccag
ttcctgaagttgaacgttaaaagctcaaatatagatgagctaaaaaacgtgatttataaa
tcccttggtaaaggtcccagtgagcaaataagaaatttctacgaagatttttatcggaac
attttggaataccactaccaagacttcagagatagggaagaagatattgaaagacttatc
gaaatggcctcattctatgattctactgaagagtttttgagtgaactgattatttctgaa
gcaagggaagcagaacttgacagaaatgaggaagaagggggaaaagtaacacttacaaca
gttcatcaggcaaagggtttagagtggaaaatagtttttgtcattggtgtcaatccgggt
gacttcccccactttttggccttgaaagatggttcaattgatgaggaagaacgcttgttc
tacgttgctataacgagggctaaagatatgctttacatcacacattccgttctttcacgt
agcgattatttcaaagcagggaaaattgaacgagacttcgttgaggatattcctccctac
ttggttgaatactggagggttaggtag
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