KEGG   Fervidobacterium islandicum: NA23_05280
Entry
NA23_05280        CDS       T04215                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
fia  Fervidobacterium islandicum
Pathway
fia03030  DNA replication
fia03430  Mismatch repair
fia03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fia00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NA23_05280
   03430 Mismatch repair
    NA23_05280
   03440 Homologous recombination
    NA23_05280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fia03032]
    NA23_05280
   03400 DNA repair and recombination proteins [BR:fia03400]
    NA23_05280
Enzymes [BR:fia01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     NA23_05280
DNA replication proteins [BR:fia03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     NA23_05280
DNA repair and recombination proteins [BR:fia03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     NA23_05280
SSDB
Motif
Pfam: RNase_T DEDDh_C RNase_H_2 DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: AMW32743
UniProt: A0AAI8CLN9
LinkDB
Position
complement(1135966..1136535)
AA seq 189 aa
MTWDDNVYCAVDIETTGIDPSGGDRIIEIAIIPIYKGKIVKEWIYTSLVNPKVSIQTYAQ
SVHKISTRDIQSAPGLDEVLAVVRKYSRDTILVFHNARFDLTFLDYAAKEVGQLPLDVYY
IDTLEISKTLYGRGKKLETLALEMGIQQKVTHRAYDDAMVTASVFIRFFDIFGWERIHEF
LRRWMGREY
NT seq 570 nt   +upstreamnt  +downstreamnt
gtgacatgggatgacaatgtgtactgcgcggttgatatagagaccacaggtattgatcca
tccggtggggatcgtattattgaaattgcaataattccaatatacaagggcaagattgta
aaagagtggatttacacatccctggtgaacccgaaagtaagtatacaaacttacgcgcag
agtgtgcacaaaatttctacaagggacattcaaagcgcaccaggactagacgaggtgctg
gctgttgttagaaaatattccagggacactatacttgttttccacaatgcgcgctttgat
ttgacatttcttgattatgcggctaaagaagttgggcaattgccgttggatgtttactac
atagataccttggagatttcaaagacgttgtacggcagaggaaaaaagcttgaaacgttg
gcattagagatgggcatccaacaaaaggttacacatcgagcgtacgatgatgcaatggtg
acagcaagcgtattcattaggtttttcgatatttttggttgggaaaggatccacgagttt
ctaagacggtggatggggagggaatattga

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