Fervidobacterium islandicum: NA23_06330
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Entry
NA23_06330 CDS
T04215
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fia
Fervidobacterium islandicum
Brite
KEGG Orthology (KO) [BR:
fia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fia03032
]
NA23_06330 (topA)
03400 DNA repair and recombination proteins [BR:
fia03400
]
NA23_06330 (topA)
Enzymes [BR:
fia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NA23_06330 (topA)
DNA replication proteins [BR:
fia03032
]
Prokaryotic type
DNA Topoisomerases
NA23_06330 (topA)
DNA repair and recombination proteins [BR:
fia03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NA23_06330 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_4
Zn_ribbon_Top1
RdfA
CK_II_beta
ThiI_fer
GRXCR1_C
zinc_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AMW32913
UniProt:
A0AAI8CLT2
LinkDB
All DBs
Position
complement(1340818..1342917)
Genome browser
AA seq
699 aa
AA seq
DB search
MAKSKVVEKDKKNELDNQSADIELKGQSKNEESKGGKKKVIIVESPAKAKTIERILGNDY
QVISSKGHIRDLPQKQFGVDLNSLKLDFEIIPGKESVVEQIKKMTSGKEVLLASDQDREG
EAIAWHLSTILGVKGKNRITFTEITERAIKEAVKNPREIDMNKVNAQLARRVLDRIVGYM
ISPLLWRIIKDARSAGRVQSAALKIICERERERYRFVPQKYFKVWIDIAGLKAYLTKVDG
KKIKPTDITEEISKDVLQKVKSVRLVDIDVKEVRKNPPAPFITSTLQQDAASKLGFPVSK
TMKIAQELYEGVDTKEGHTAFITYMRTDSTRVSDVAKEAAEKFILKNFGREYLNESSEVA
SKKGSKTKGKMQDAHECIRPVDVNITPEKAKELLDKDHHKLYELIWKRFIASQMSSAIYK
QYSYDFESGKYVFEASIRERIFDGFEKVYTIDNEPSEKHKELKVDQEYLVEPKSAEAQTT
PPDRYTEASLVKTLEMEGIGRPSTYATIIQTLLDRGYVVKKRKTLIPTILGFVVNHYLEQ
RFPDIVDKGFTAEMEKELDEVENGKKDWKEVVKSFLKEFNKDLERAKNEFFAIDFDTDIT
CEDCSGNYKLKVGKYGLYLHCPNCKTNKALKSDVFGVIDGNKLYVLEEQESQEENGEKNS
VQSEESSANSGNRKFYRKRRTSGSKKSSTKSASSKAKKK
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatctaaagtcgttgaaaaagataagaaaaacgaattggataaccagagcgct
gatattgaattgaaaggacaaagcaagaacgaagaatccaaaggcggtaagaagaaagta
attatcgttgaatcacctgcgaaagcgaagacaatagagcgaattctcggaaacgattat
caagtcatatcctcaaaaggtcatatccgagacctgcctcaaaagcaatttggagtagac
ctgaattcactcaaactggattttgagattattccaggcaaggaaagtgtagttgagcag
ataaagaagatgacttccgggaaagaggtactacttgcgtctgaccaagaccgcgaaggt
gaagctatagcttggcatctttcaacaatcctcggagttaaaggaaagaatagaattacg
tttacagaaatcaccgagcgtgcaataaaagaagcggttaagaatcctcgagagatagat
atgaacaaggtaaacgcacaacttgcacgcagggtacttgatagaattgtgggctacatg
attagcccattactttggcgtatcataaaggatgcaaggagtgctggaagagtccaatca
gctgcattgaagataatttgtgaacgtgaaagggaacgctacagatttgtcccgcaaaaa
tatttcaaggtctggatagatatcgctggtttgaaagcgtacttaacgaaggtcgatgga
aagaaaataaaacctaccgatatcactgaagaaatctcgaaagatgtacttcaaaaagtt
aagagcgtacgattggtagacatcgatgtcaaggaagtaagaaagaacccacctgcacca
ttcataaccagtactttgcagcaggacgctgcaagcaaactcggttttccagtttccaaa
acgatgaaaattgcccaggaattgtacgaaggcgtggatacaaaagaaggtcataccgcg
ttcataacttacatgagaacagattcaacaagggtgtcagacgtggctaaagaagctgcg
gaaaagtttattttgaagaatttcggaagagaatatctcaacgaaagttcagaagttgca
tcaaagaagggctcaaagacgaaaggtaagatgcaggatgcacacgaatgtataagacct
gtcgatgtgaatattacacccgaaaaggcgaaagaattactagataaggaccaccataag
ttgtacgaactcatctggaaacggttcatcgcatcgcagatgagcagcgctatttacaaa
cagtacagctacgatttcgagagtggaaagtacgtttttgaagcgagcataagggaacgt
atattcgacggttttgagaaagtgtacacgatagataacgaaccgagcgaaaaacacaag
gagttgaaagtagaccaagaatacttagtcgaaccgaaatctgcagaagcgcagacgaca
cctccggatagatatacagaagcttctcttgtcaagacgctcgagatggaaggaatagga
cgaccgagtacatacgcaactattattcaaacgcttctggacagaggttatgtggttaag
aaaagaaagacactgatacctacaatccttgggttcgttgtgaaccattatctcgagcaa
aggtttccagatatagttgacaaggggtttacggctgagatggaaaaggaactcgacgag
gtagagaacggcaagaaggattggaaagaagtcgttaagtcgttcctaaaggagttcaac
aaagaccttgagagagccaaaaacgagttctttgcaatagactttgacaccgatataact
tgtgaggattgctcaggtaattacaaactcaaggttgggaagtacggcttgtatttgcat
tgtccaaactgcaaaacgaacaaggcgttgaaatcggatgtgttcggcgtcatagatgga
aacaagttgtacgttttagaagaacaagagagtcaagaagagaacggtgaaaaaaatagt
gtgcaaagtgaagaatcgtcagccaactctggtaatagaaaattctaccgaaagagaaga
acttcaggaagcaaaaaatcaagtaccaaaagtgcctcatcaaaagcgaagaagaaataa
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