Fervidobacterium islandicum: NA23_08165
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Entry
NA23_08165 CDS
T04215
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
fia
Fervidobacterium islandicum
Brite
KEGG Orthology (KO) [BR:
fia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fia03016
]
NA23_08165 (thpR)
Enzymes [BR:
fia01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
NA23_08165 (thpR)
Transfer RNA biogenesis [BR:
fia03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
NA23_08165 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
UDP-g_GGTase
DUF3775
Motif
Other DBs
NCBI-ProteinID:
AMW33214
UniProt:
A0AAI8CM92
LinkDB
All DBs
Position
complement(1719906..1720478)
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AA seq
190 aa
AA seq
DB search
MRTFIAIDINPEIREVGQEIIDKLASIGFKATWTKPENLHLTLFFLGEMDEKAVDSMAHA
LQKRLQGFPSFSTSLSGFGYFKFKHSPRVLFLKLEPTKSLQRLFLEMKSELNKNKIKYDE
QGNFVPHVTLGRVKEYPNDWEKLVEDIQTPKITLVVDGVTIYSSTLTPQGPIYKWVYKLK
FEGGLMKNVR
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
gtgaggacgttcatagctatagacataaatccggagatacgagaagtaggacaggaaatc
attgacaaactcgcttctataggattcaaagccacgtggacaaaaccagaaaatcttcat
ctaacattatttttccttggagagatggatgaaaaggctgttgattcaatggcccacgca
cttcaaaaaaggttacaaggttttccttcgtttagcacgagtttgtcaggttttggttat
tttaaattcaaacattcaccgagggtgctgtttttgaagcttgaacccacgaagtctttg
cagaggttgttccttgaaatgaagtctgaactcaacaagaacaagatcaaatacgatgaa
caagggaactttgttccacacgttacgttgggcagggtaaaggaatatccgaacgattgg
gagaagctcgttgaagatatccaaacgccgaagataacactcgtagttgacggggtaacc
atttacagctctacattaacaccacagggtcccatttacaaatgggtatataaactgaaa
tttgagggaggtttgatgaagaatgtcagatga
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