Fervidobacterium islandicum: NA23_08175
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Entry
NA23_08175 CDS
T04215
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
fia
Fervidobacterium islandicum
Brite
KEGG Orthology (KO) [BR:
fia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fia03009
]
NA23_08175 (rimO)
Enzymes [BR:
fia01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NA23_08175 (rimO)
Ribosome biogenesis [BR:
fia03009
]
Prokaryotic type
ribosomal protein modification factors
NA23_08175 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
fvmRadSAM-pep
Motif
Other DBs
NCBI-ProteinID:
AMW33215
UniProt:
A0AAI8CMN0
LinkDB
All DBs
Position
complement(1721113..1722408)
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AA seq
431 aa
AA seq
DB search
MKLYIVVLGCPKNEADFSLFKHHIRQLGHEIVDDLDEADGVVVDTCGFILDAKQESIDTV
LEFVEHKKKLEKEGKDFKIFVTGCLVQRYPKDLPVEIPEVDGWFGVLPPKVLADNLEKTK
KYITDPIAVYDFEGRVDDDLPYAYVKIADGCDRACTFCTIPKFKGGFVSRKIEDIVREVE
YLVSEGKKEIILVAQDTTGYGVDLYGKPMLPELLKRLNEVPGEFWIRVMYMHPDHVTDEI
LAGFSHEKVLKYFDIPVQHGSAKILKLMNRTKTPEELERLFEKIREMYPEAVLRTSIIIG
FPGETAKDFEELLEFIRRIEFDKLGAFIYSDEEDAPSYKLSHKVRLSTAQKRLDQLMEAQ
AEISLLRNQRYVGKVINVLIDEEASGVLIGRGYMDAPEIDGNVFFKGSNKKGFVKVKITE
ADTYDLEGELV
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
ttgaagttatacatcgttgttttgggatgtcccaagaatgaggcagatttttcgttgttc
aagcaccacattcgacaacttggacacgaaattgtggatgatttagatgaagcagacgga
gtagttgttgatacgtgtgggtttatattagatgccaaacaagagtcgattgatacggtt
ttggagtttgttgagcacaaaaagaagcttgagaaagaagggaaggatttcaaaatcttt
gttactggatgtctggttcaaaggtaccctaaagatttgccagtggaaattccggaagtt
gacggatggtttggagttttgccacccaaggttctggcagataacctagaaaaaacaaaa
aagtacataacggatcctatagcggtatacgattttgagggaagggttgatgacgacctt
ccgtacgcgtacgtaaagatagccgatggttgtgatcgtgcatgtacgttttgtaccata
ccaaaattcaaggggggttttgtaagcagaaaaattgaagacatagtcagagaggttgaa
tacttggtttcagaaggtaagaaagagattatcttggtagcacaggatacaacgggatac
ggggttgatctgtacgggaagcccatgcttccagagttactcaagaggttaaacgaagta
cctggagaattttggatcagggttatgtacatgcacccagatcacgtaacggacgaaatc
cttgctgggttttctcatgaaaaagtactcaagtatttcgacatcccagtccaacacggt
agtgcgaagattttaaaactgatgaacagaacgaaaacacctgaagaactcgagagattg
tttgagaaaattagggaaatgtaccctgaagctgtgcttagaacgtcgataattataggt
tttcccggagaaacggccaaggattttgaggaacttctggagttcataaggcgtattgaa
tttgacaagctcggggcctttatctactcagacgaagaagatgcaccatcgtacaaattg
tcgcacaaagttcgactttcaacggctcaaaaaaggttggaccaactaatggaagcacaa
gcggagatttcgctgcttagaaatcaaaggtacgtgggaaaagttatcaatgtgttaatt
gatgaagaagcaagtggcgtgcttataggacgtgggtacatggatgctcccgaaatcgat
ggtaacgtctttttcaaaggcagcaacaagaaagggtttgtgaaagtgaaaattacagaa
gctgatacatacgacctggagggagaactggtttga
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