Fibrella sp. ES10-3-2-2: A6C57_13655
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Entry
A6C57_13655 CDS
T04805
Name
(GenBank) RNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
fib
Fibrella sp. ES10-3-2-2
Brite
KEGG Orthology (KO) [BR:
fib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fib03016
]
A6C57_13655
Enzymes [BR:
fib01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
A6C57_13655
Transfer RNA biogenesis [BR:
fib03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
A6C57_13655
Prokaryotic type
tRNA splicing ligases
A6C57_13655
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
ARK11278
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All DBs
Position
3398041..3399576
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AA seq
511 aa
AA seq
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METSLTLDDILTLGPIPEALQPAFLRVANGLTQRAEYPREKVMGLLAQMLQNPKKYAFSK
NKVTNLAQSVYELTKQGIAIPLSETGATYLPTEPAPYVLGTDQKQAENTFALRNGPLPYT
IFGRDFIEEGALKQMQTAASLPVSVAGALMPDAHQGYGLPIGGVLATEANTVIPFAVGVD
IACRMCLSIFDLEADFLKREPHLLKKSLVEQTKFGIGGETRDKIDESVMDLPEWQATKVI
RDLKDKAYRQLGSSGTGNHFVEWGLVEVYADEATETGLNLPPGEYLALLSHSGSRGFGGN
VANYYSKLAMQKTKLPKEAAHLAWLDLNTQEGQEYWIAMNLAGEYASANHHEIHRKLAKA
LREKPLVMVENHHNFAWKEQLADGREVIVHRKGATPAGPDVLGIIPGSMTQPGYVVRGRG
NANSINSASHGAGRLMSRTQAFNSITRSQWNKALVEADIQLVGGDLDEAPMVYKDIDTVI
DAQRELVSVLAKFTPKIVRMADANRKEGRED
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgtctttaacacttgatgatatcttaacactcgggccaatacccgaggcgtta
caacctgcttttctccgtgtggccaatggcctgacgcagcgggctgagtacccccgagag
aaagtgatgggcttactggcgcagatgctccagaacccgaaaaaatacgcgttctcgaaa
aataaagttaccaacctggcgcagtcggtttatgaactgaccaaacagggaattgctatt
ccgctgagcgaaactggtgcaacgtacctgcccactgagcctgctccctacgtgctgggt
accgatcagaagcaggctgaaaatacatttgcgcttcgcaacgggccgctaccctatacc
atatttgggcgtgatttcatcgaagaaggggcgttgaaacagatgcagaccgctgccagc
ctgccggtgtcggtggcaggtgcgctcatgcccgatgcgcatcagggctatggtctgccc
atcgggggcgtgctggcaacggaggcaaatacagtgattccgtttgccgtgggcgtcgac
attgcctgtcgtatgtgcctgtcgatctttgatttggaggctgatttcctgaagcgggaa
ccgcatctgctgaagaagtcgctggtggaacagaccaagtttggcatcgggggcgaaacc
cgcgataagatcgacgagagtgtgatggatttacccgaatggcaagccaccaaggtcatt
cgtgatctgaaagacaaggcttaccggcaattgggcagctctggaacgggtaatcacttt
gtggagtggggccttgtcgaggtgtatgccgacgaggctacggaaacggggttaaacctg
ccgccgggcgaatacctggccttgttgtcgcattcgggctcgcggggctttggcggaaac
gtagccaactactactcgaaactggctatgcagaagacgaagttgcccaaagaagcggct
cacctggcctggctcgatctgaacacgcaggaggggcaggaatactggattgcgatgaat
ctggcgggtgaatacgcctcggccaatcaccatgaaattcaccggaaactggcgaaggcc
cttcgcgagaaaccgctggtgatggtggagaatcaccacaatttcgcgtggaaagaacaa
ctggcggatggacgcgaggtgatcgttcatcgcaaaggagccacacccgccggaccggat
gtgttgggcatcattcccggctcgatgacccaaccgggctacgtggtgcgcggacgcggc
aatgccaattcgatcaattcggcctcgcatggggctggccgactgatgtcacgtacccag
gcgttcaactccatcacgcgctcgcagtggaacaaagcactggtggaagcggatattcag
ttggtgggtggcgacctcgacgaagcgccgatggtctacaaagacatcgataccgtgatc
gacgctcagcgtgagttggtgtcggtactggcaaaattcacgcccaagatcgttcggatg
gccgatgctaaccggaaagaagggcgggaggattag
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