Fibrella sp. ES10-3-2-2: A6C57_16955
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Entry
A6C57_16955 CDS
T04805
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
fib
Fibrella sp. ES10-3-2-2
Brite
KEGG Orthology (KO) [BR:
fib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fib02000
]
A6C57_16955
Transporters [BR:
fib02000
]
Other transporters
Pores ion channels [TC:
1
]
A6C57_16955
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
CarbopepD_reg_2
TonB_dep_Rec_b-barrel
CarboxypepD_reg
MetallophosN
MG4
TTR_TEN1-4
CooC_C
DUF7209
Big_1
Motif
Other DBs
NCBI-ProteinID:
ARK11882
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All DBs
Position
4236278..4239436
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AA seq
1052 aa
AA seq
DB search
MKNTLQRVCPKALIFLLSWMLCLGAMAQDRRITGQIKDEQGSPLPGVSVVIKGTTQGTTT
DAQGGYSLAVPNANSTLVFSFVGYTAQEVLVGNQTAISLSLLNDDKALDEVVVIGYGTTR
KSDLTGAVATVKQSQLMERPAPSLNQALSGRMPGVQVNTNSGRPGGRTTVRIRGFSSINS
SNNPLYVVDGVMLPQGNQNQFSSAIDYINPNDIVSVEVLKDASSTAIYGARGANGVILVT
TKKGKAGEGQITYNSDFSVNTIGPNRPHTLNAREYLATEDLAYANIAKFDPAGWASGKYA
NLDPVARRKQFSAAHPGIFDANLNPLYDTDWFKEATQNKLSQNHQLGFSGGNERTQYSLS
LGYRNDQGLIKTSYMKRYSTRFTIDDQVKKWLKVGGTLSYNNQSENLVDQNDAVARQMVE
DFPFLPVQYPDGSYASNRDYPSAEGSFSSIHRLMDRRFILNTQTSLGSLYTNINLAKGLE
MRTVLGVNILTQENNESQTRTLNPGSFGNAAARNRKESFWSLENYLTYNKQIGEDHHITA
LAGISWQETNIFSVGATVNNFATDYFGYNNLGAGATNPQVSSGASRFAFNSYFGRINYNF
LDKYLFTVTGRADGSSKFGANHKFAFFPSAALAWRVSEESFLKGNSVISNLKLRTSYGLT
GNSEIPPYSSLALLSSNYSTIYNDTRVGGTGIDRLANPDLRWEKTAQTDVGLELSLFKGR
VSLEADYYYRLTTDMLLDAPVPRTSGYGTIRRNVGSMQNAGFEFGLNTTNFDGTDFTWNT
TFNISLNRNKVLSLATPSDIFNVGGPNFTNPTNIIRIGEPVGSFWGLTRLGVWSEAEREE
ASKFASYRNNLTLLPGDIKYLDVNGDKAITDADRSIIGNGSPKGWGALTNSFRYKKFDAT
IELQFMYGNDVMLMNLHASEDRQALANSYSSVLNAWTPQNQNTPIAQIRETRAGYVTNVD
SHWIKDGSFLRGRNFLIGYTLPSQVTNRLKVNRLRFYATAQNVFLLVKDPIVGDPEVTPT
NQGDGNSAFSQGMIWHNYPKPTTYLVGLQIGL
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacactttacaacgagtatgtcctaaggcattgatattcctgctgagctggatg
ctgtgcttgggcgctatggcgcaggatcgacggatcaccggccagataaaagacgagcag
ggttctcctctgccgggcgtgagtgtcgtgatcaaaggcacgacacagggcacgacaact
gatgcccagggagggtattcgctggctgttcccaacgccaattcaaccctggttttctct
tttgtggggtacaccgctcaagaggtactggttggcaaccaaaccgccatcagtctatcg
ctcctcaatgatgataaggcgctggacgaggttgtagttattggttacggtacaacccgg
aaatcagatttaaccggtgctgtggcgacggtgaagcaatcgcaattgatggagcgtccg
gctccttcgctcaaccaggcgctgtctggccggatgcccggtgtgcaggttaataccaac
tcaggtcgtcccggtggccgtacaaccgttcggatccgggggttcagctcgatcaactcg
tcgaataaccctctgtatgtcgtcgacggtgtgatgctgccgcaggggaaccaaaaccag
ttcagttcggccatcgattacatcaacccgaacgatattgtgtcggttgaagtactgaaa
gatgcctcatcgactgctatttacggggctcgtggcgcaaacggcgttattctggtaacg
actaagaaaggcaaagcaggcgaaggacagattacctacaactctgatttcagcgtcaat
acgatcggccctaaccgcccccataccctcaacgcccgcgaatacctggccactgaagat
ctggcctatgcaaacatcgccaagtttgacccggccggctgggcgtcgggcaagtacgct
aacctggaccctgttgcccgccgcaagcagttcagcgcggcgcatcccggtatcttcgat
gccaacctgaacccactttacgacaccgactggttcaaggaggccacgcagaacaagctg
tcgcaaaaccatcagctgggtttcagcggtggcaacgaacgtacccagtactcgctttca
ttaggctaccggaatgatcagggcctgataaaaacgtcgtacatgaaacgctattcaacc
cggttcaccatcgatgatcaggtgaaaaaatggttgaaagttggcggtacactcagctac
aacaaccagagcgaaaacctcgtcgatcagaatgatgcggtagcccgccaaatggtggaa
gacttcccgttcctgcccgtacaataccctgatgggtcttatgccagtaaccgggactac
ccgagtgccgagggctctttcagctcaattcaccggctgatggaccggcgtttcattctg
aacacgcaaacgtcgctgggtagcctgtacacgaacatcaacctggccaaagggctggag
atgcgcactgtattgggcgtaaacatcctgactcaggagaacaacgagtcgcagacgaga
acgctgaatccgggttcgtttggtaatgctgccgcccgtaaccggaaagagagcttctgg
tcgctggagaattacctgacgtataacaagcagattggtgaagaccaccatattacggca
ctggccggtatctcgtggcaggaaaccaacattttcagtgttggtgccacggtgaacaac
ttcgcaactgattacttcggctacaataacctgggggctggtgccaccaatccacaggtg
tcgtcgggagcatcccggtttgcgttcaattcgtacttcggccggataaactataacttc
ctcgacaagtacttattcaccgtaacgggtcgggccgatggctcatctaaattcggagct
aaccacaagttcgcgttcttcccctcagcggccctggcctggcgggtatcggaagagagc
ttcctgaagggtaactcagtgatttcgaacctgaaactgcgtaccagctacggcctcacg
ggtaactcagaaattccgccttactcatcgctggcgctgctcagctcgaactactcgacc
atttacaacgacacgcgcgttggtggaacgggtatcgatcgcttggccaaccccgacctg
cgttgggaaaaaacggcgcagacagacgttggtctggagctctcactctttaaaggacgg
gtgtcgctggaagcggattactattatcgtctgacgaccgacatgctgctggatgcacct
gtaccacgtactagtggctacggcaccattcgccggaacgtagggtcaatgcagaacgcc
ggttttgagtttggcctgaacaccaccaacttcgatggtactgacttcacctggaacaca
acgttcaatatctcattgaaccgtaataaggtgctgtcgctggctacgccgtctgacatc
ttcaacgtaggtggtcctaacttcaccaacccaaccaacatcatccgcatcggtgagccg
gtaggttcgttctggggcctgacgcgcctgggtgtgtggagcgaagccgaacgcgaagag
gcgtctaagttcgccagctatcggaacaacctgacgctgctgcctggcgacatcaagtac
ctggatgtaaacggcgacaaggccatcaccgatgccgaccggagtatcattggcaacggc
agcccaaaaggatggggcgcactgaccaacagcttccgttacaagaagttcgacgcaacc
atcgagcttcagttcatgtatggcaacgatgtgatgctgatgaacctgcacgccagtgaa
gaccggcaggcgctggccaacagctacagctcagtgctgaacgcctggacaccccagaac
cagaacacgcctatcgcgcagatccgcgagacccgggccgggtacgtaacaaacgttgat
tcgcactggatcaaagacggatcgttcctgcgtggccgtaacttcctgattggctacacc
ctgccttcgcaggtcaccaaccggttgaaagtaaaccggctgcgtttctacgcaaccgca
caaaacgtgttcctgctggtgaaagaccctatcgttggcgatccggaagtgacgccaacc
aaccagggtgatggcaacagtgccttctcgcagggtatgatctggcacaattaccccaag
ccaaccacgtacctggtcggtctgcagattggcctctaa
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