Fibrella sp. ES10-3-2-2: A6C57_17715
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Entry
A6C57_17715 CDS
T04805
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
fib
Fibrella sp. ES10-3-2-2
Pathway
fib03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A6C57_17715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fib03019
]
A6C57_17715
03009 Ribosome biogenesis [BR:
fib03009
]
A6C57_17715
Enzymes [BR:
fib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A6C57_17715
Messenger RNA biogenesis [BR:
fib03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A6C57_17715
Ribosome biogenesis [BR:
fib03009
]
Prokaryotic type
rRNA helicases
A6C57_17715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UBA
Cas3-like_C_2
AAA_19
AAA_30
Helicase_RecD
AAA_22
UBA_3
UBA_DHX29
Motif
Other DBs
NCBI-ProteinID:
ARK13723
LinkDB
All DBs
Position
4411219..4413105
Genome browser
AA seq
628 aa
AA seq
DB search
MTVQPVVAKGFTFADLNVSADILAAVTEMGFTTPSPIQAEAIPPILAGRDVIGQAQTGTG
KTAAFGIPALELIDPSDRSVQVLILCPTRELAVQVTDELRKLSKFKRGIYIETIYGGDSI
ERQIRSLKKGVHIVVGTPGRVMDHMQRNTLKLDDAKMIILDEADEMLDMGFREDIESILE
DFPEERQTVLFSATMSKPILAMTQRFQVNPVMVKVVKKELTNVNIEQVYFEVKPKAKTEV
MCRLIDLYDLKLMLVFCNTKRKVEEIVEDMMIRGYQAEGLHGDLRQAQRSNVMSKFRAGT
TTILVATDVAARGIDVDNVDAVINYDIPLDEEYYVHRIGRTGRAGKSGRAFSLVSRDEKF
RFRDIQTYTKVRVDKGVIPSFEDIVGIRKARFIEQLEVDITESKDLHLYDDMLTQLQHTG
FSTEQIVAALMKRSMGIEKNEFSDKDLNEEDRRNGNSSNRFEDRGPREGGRGRFDDRRND
SRGGGRFEDRRGGDRGGRFESRGTDSRGGGRFEDRRGGGRFEDRGPRPEREGGKEGYFAR
SNERPVREREPNMTRLSVSIGRRDYVRPGDLVGAIAGESGIPGSSIGSIDIFDKHTFVDV
PNDVANRVVQAMDGNNIKGRQVNVEIAK
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atcaccgtacagcctgtcgttgccaaaggatttaccttcgccgacctgaacgtgtcggcc
gatattctggctgccgttacggaaatgggctttacaacgccgtcaccaatccaggccgag
gctatcccaccaattctggctggtcgcgacgtaattggacaggcgcagacgggtaccggt
aaaacggccgcgtttggtattcccgcccttgaactgatcgacccaagcgaccggagcgta
caggtgcttatcctgtgcccaacccgcgaactagccgttcaggtaacagacgaactacgt
aaactcagcaaattcaagcggggtatttatatcgaaacgatctacggtggcgactcaatc
gagcgccagatccggtcgctgaagaaaggagttcacatcgtggtaggtacgcctggccgt
gtgatggaccacatgcaacgcaacacgctgaagctcgacgacgccaagatgatcattctt
gacgaagccgacgaaatgctggacatgggcttccgtgaagacatcgaaagtattctggaa
gacttcccggaagagcgtcagacagtgctgttctcggctactatgtcgaagccaattctg
gccatgacgcagcggttccaggtaaacccggtgatggtgaaggtggtgaagaaagaactg
accaacgtcaacattgagcaggtctatttcgaggtgaagccgaaagctaaaaccgaagta
atgtgccgcctgatcgacctgtacgatctgaaactgatgctggtgttctgtaacacgaag
cggaaggtagaggaaatcgtggaagacatgatgattcgtggctaccaggccgaggggctg
catggtgacctgcgtcaggcgcagcggagcaacgtgatgagcaagttccgtgcaggtaca
actacgatcctggtggctactgacgtggctgcccgtggtatcgacgttgataatgtagat
gcggttatcaactatgatatccccctcgacgaagaatattacgtacaccgtattggccgt
accggccgcgccggtaaatcgggtcgtgcgttctcactggtgagccgcgacgagaaattt
cggttccgtgatattcagacttatacgaaggtacgggttgacaaaggcgttatcccttcg
ttcgaagatatcgttggcatccggaaagctcgctttatcgagcaactggaagttgatatc
acagagagcaaagacctgcacctatacgatgacatgctgactcaactgcagcacacgggc
ttctctacggagcagatcgtggccgcgctgatgaagcggagcatgggcatcgagaaaaat
gaattctcggataaagacctgaacgaagaagatcgtcgcaacggtaactcgtcgaatcga
ttcgaagatcgtggtcctcgcgaaggcggtcgtggtcgtttcgatgatcgtcgcaatgat
tcacgcggtggtggccgtttcgaagatcgtcgtggtggcgatcgtggcggacgttttgaa
agccgtggtaccgattcgcgtggcggtggtcgtttcgaagatcgtcgtggaggcggtcgc
ttcgaagaccgtggccctcgtccggagcgtgaaggaggtaaagagggttatttcgctcgc
agcaacgaacgtcctgttcgtgagcgtgagccaaacatgactcgcctgagcgtaagcatc
ggtcgtcgtgattatgttcgtccgggtgatttggttggcgcaattgccggcgagtcaggt
atcccaggcagcagcattggcagcattgatatttttgacaagcacacgttcgtcgacgta
cctaatgatgtagcgaaccgcgtggtgcaagccatggacggtaacaacatcaaaggccgt
caggtaaacgtagagatcgctaagtaa
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