Fibrella sp. ES10-3-2-2: A6C57_21930
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Entry
A6C57_21930 CDS
T04805
Name
(GenBank) DNA helicase
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
fib
Fibrella sp. ES10-3-2-2
Brite
KEGG Orthology (KO) [BR:
fib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fib03009
]
A6C57_21930
03012 Translation factors [BR:
fib03012
]
A6C57_21930
Enzymes [BR:
fib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
A6C57_21930
5.6.2.5 RNA 5'-3' helicase
A6C57_21930
Ribosome biogenesis [BR:
fib03009
]
Eukaryotic type
Other ribosome biogenesis factors
A6C57_21930
Translation factors [BR:
fib03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
A6C57_21930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_30
ResIII
AAA_19
Viral_helicase1
UvrD-helicase
SLFN-g3_helicase
DEAD
PhoH
Helicase_RecD
AAA_22
AAA_16
T2SSE
UvrD_C_2
nSTAND3
AAA_14
AAA_25
ATPase_2
NPHP3_N
AAA_24
Herpes_ori_bp
AAA_7
cobW
SRP54
DAP3
AAA
SNF2-rel_dom
AAA_28
ABC_tran
HEM4
TraI_hel_assoc_N
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ARK13795
LinkDB
All DBs
Position
5501849..5503747
Genome browser
AA seq
632 aa
AA seq
DB search
MEYFKKLLDLLKTERDEDRYQYQQLTQSTSVAERRANGLTWYPIAIRGSELGRGDYLTVE
VERTTHQDLSHQLRTGVPAVLFSNHDPKVDRVEGTVSFQNGNRLKITLLTDELPDWSRNG
KLGIELLFDDTSYDDMQEALKQANTLGEGNTNRLITILTGSASPTVNDTLPAVSIPRLNP
SQQQAVQTILAANELAVVHGPPGTGKTTTLVQAIKALNEQDHKQLLVVAPSNAAVDLLSE
KLHDEGLNVLRVGNPSRISDRLTALTLDHKMGEHSLMREAKKLKKQANEYKTMAHKYKKS
FGKAERDQRKALFDEAHRIQKEVATTEQYIIDDLVGRAQVITATLVGANNYTIRGLTFHT
VVIDEAGQALEPACWIPILKAQKVVLAGDHCQLSPTIKSVEAARNGLSVTLLEKCIARHP
EAVRLLDEQYRMHAHIMGYSASVFYGNQLRAHASVAEHALFPGDSALHFIDTAGCGFEEK
LEGTSSTNPDEAALLIKHLTQVVAELGQFYTPANFPSIAIISPYKQQLAVLNEQLTHAPD
LQPYRQSISVNTIDSFQGQEREIVYISMTRSNDRAEIGFLSDIRRMNVAMTRARKKLVVI
GDSATLGSQAFYADFITYAEKLNGYQSAWEWL
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggagtattttaaaaaactgcttgatctactgaaaacggagcgggacgaagaccgctac
cagtaccaacaactcacccagtcgaccagtgtggccgagcgccgggccaatggccttacc
tggtaccccatcgctattcggggctctgaactgggtcggggcgattacctgaccgtggaa
gtagagcgcaccacccatcaggacctttctcaccaactcagaacgggcgtaccggcagtc
ttattcagcaaccacgatcccaaagtagaccgggtcgagggcacggtttcgttccagaac
ggaaaccgactcaaaatcacgctgctcactgatgagttacccgactggtcgcgcaacgga
aagctgggtattgaactgcttttcgacgacaccagctacgacgacatgcaggaggcgcta
aagcaggccaataccctcggtgaaggcaacaccaatcgcctgatcaccatcctaaccggt
tctgcctcgccgaccgtcaacgataccctgccagccgtcagcattccccggctcaacccc
agccagcaacaggccgtacagacaattttggcggccaatgaactggccgtggtgcatggg
ccgccgggcacgggcaaaaccactacgctcgtgcaagccatcaaggcgcttaatgaacag
gaccacaagcagcttctggtggtagctcccagcaacgcagccgttgatttgctgagcgaa
aaactgcacgacgaaggcctgaacgtgttgcgcgtgggtaatccgagccggatttcggat
cggctaacggccctgacgctcgaccacaagatgggtgagcacagcctgatgcgggaggct
aaaaaactaaaaaagcaggccaatgagtacaaaacgatggcccacaagtataaaaagagc
tttggtaaagccgaacgcgaccagcgaaaagcacttttcgacgaggctcaccgtattcag
aaagaggtagccaccaccgagcagtacatcatcgatgacctggttgggagggcgcaggtc
attaccgccacgctggtgggagccaacaactacaccattcgcggtcttaccttccatacg
gtggtgatcgatgaagccggtcaggcactggaacccgcctgctggattccaatactgaaa
gctcaaaaggtcgtgttggcgggagaccattgccaactatcacccactatcaaatcagta
gaggccgcgcgcaacgggctgagcgttaccctgctcgaaaagtgcatcgcgcggcatccc
gaggccgtgcgtctgctcgatgagcagtaccggatgcatgcccacattatggggtactcg
gcctcggttttctacggcaatcagttgcgggcccatgcatcagtggcggaacacgcgctg
tttcccggtgacagtgcgctacactttattgatacggccggttgcggattcgaagagaaa
ctggagggcacaagctcaaccaaccccgacgaggccgctctgttgatcaaacacctcacc
caggttgtggctgagttgggccagttctacacgcccgccaacttccccagcattgccatt
atatcgccctacaagcagcaactggctgtgttgaacgagcagctgacacatgcacccgac
ctgcaaccctaccgccagtcgatctcggtcaataccatcgatagttttcaggggcaggaa
cgcgagattgtttacatttccatgacccgaagcaacgaccgggccgagatcggatttcta
tccgacattcgccggatgaacgtggcgatgacccgggcccgcaagaaactggttgtcatc
ggcgatagcgccacactgggaagtcaggctttctatgccgatttcatcacttacgccgag
aaactcaacggctaccagagcgcctgggaatggctgtaa
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