Candidatus Filomicrobium marinum W: BN1229_v1_0185
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Entry
BN1229_v1_0185 CDS
T03856
Symbol
groEL
Name
(GenBank) chaperone Hsp60, peptide-dependent ATPase, heat shock protein
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
fil
Candidatus Filomicrobium marinum W
Pathway
fil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BN1229_v1_0185 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fil03019
]
BN1229_v1_0185 (groEL)
03110 Chaperones and folding catalysts [BR:
fil03110
]
BN1229_v1_0185 (groEL)
03029 Mitochondrial biogenesis [BR:
fil03029
]
BN1229_v1_0185 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fil04147
]
BN1229_v1_0185 (groEL)
Enzymes [BR:
fil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
BN1229_v1_0185 (groEL)
Messenger RNA biogenesis [BR:
fil03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BN1229_v1_0185 (groEL)
Chaperones and folding catalysts [BR:
fil03110
]
Heat shock proteins
HSP60 / Chaperonin
BN1229_v1_0185 (groEL)
Mitochondrial biogenesis [BR:
fil03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
BN1229_v1_0185 (groEL)
Exosome [BR:
fil04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
BN1229_v1_0185 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
BN1229_v1_0185 (groEL)
Exosomal proteins of breast cancer cells
BN1229_v1_0185 (groEL)
Exosomal proteins of colorectal cancer cells
BN1229_v1_0185 (groEL)
Exosomal proteins of bladder cancer cells
BN1229_v1_0185 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
SHOCT-like_DUF2089-C
Motif
Other DBs
NCBI-ProteinID:
CFW99451
UniProt:
A0A0D6JAZ6
LinkDB
All DBs
Position
1:complement(187165..188817)
Genome browser
AA seq
550 aa
AA seq
DB search
MAAKDVRFSADARERMLRGVDILANAVKVTLGPKGRNVVIEKSFGAPRTTKDGVTVAKEI
ELEDKFENMGAQMLREVASKTNDIAGDGTTTATVLAQAIVREGLKSVAAGMNPMDLKRGI
DKAVVQVVEIIGKKAKKVKDSNEITQVGTISANGEIEIGEMIAEAMQKVGNEGVITVEEA
KSLETELDVVEGMQFDRGYLSPYFITNAEKMIAELDDPYILIHEKKLSGLQPLLPVLETV
VQTGKPLLIIAEDIEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIATLTNGQT
ISEDLGIKLENVSIDMLGRAKRVTITKDDTTIVDGAGKKKDIEARVSQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGATEIEVKERKDRVDDALNATRAAVEEGVVPGGGVMLL
KASAAIDVEGDNEDQEAGIQIVRRALQAPIRQIADNAGVEGSIVVGKVLETRGQSFGYDA
QNDEYGDMLEKGIIDPAKVVRTALQDAASIASLLITTEAAVAEAPKKDAGHSHGGGGMGG
MGGMGGMDMM
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaggacgtacgcttttcggcagatgcccgcgagcgcatgctgcgcggcgtc
gacatcctcgccaacgcggtgaaggtcacgctcggccccaagggtcgcaacgtcgtcatt
gaaaagtctttcggtgcaccgcgcactacgaaggacggcgtcaccgttgctaaggaaatc
gaactcgaagataagttcgagaacatgggcgcacagatgctgcgcgaagtcgcttccaaa
acgaacgacatcgctggcgacggcaccaccaccgccaccgttctcgcacaggctatcgtt
cgtgaaggcctgaagtcggttgccgctggtatgaacccgatggacctgaagcgcggcatc
gataaggccgttgtccaggttgtcgaaatcatcggcaaaaaggcaaagaaggtcaaagac
tcgaacgaaatcacccaggtcggcaccatttccgcaaacggtgaaatcgaaatcggcgag
atgatcgctgaagcaatgcagaaagtcggcaacgaaggcgtcatcacggttgaagaagcc
aagtcgctcgaaaccgaactcgacgtcgtcgaaggcatgcagttcgaccgcggttacctc
tcgccgtacttcattacgaacgccgagaagatgatcgccgaactggacgatccttatatc
ctcattcacgagaagaagctttccggtctccagcctctgctccccgttctcgaaacggtt
gtgcagacaggcaagcctctcctcatcattgctgaggacatcgaaggcgaagccttggcg
accctcgtcgtcaacaagctgcgtggcggcctcaaggttgctgccgtcaaggctcccggc
ttcggcgatcgccgcaaggccatgcttgaggacatcgcgaccctcacgaacggtcagacg
atttccgaagacctcggcatcaagctcgagaacgtctccatcgacatgctgggccgtgct
aagcgcgtgaccatcacgaaggatgacaccacgatcgttgacggcgcaggcaagaagaag
gacatcgaagcccgcgtttcgcagatcaaagcacagatcgaggaaacgacgtccgactac
gaccgtgaaaagctccaagagcgtctcgcaaagctggctggtggcgttgctgtcatccgc
gtcggcggagcgaccgaaatcgaagttaaggagcgcaaggaccgcgttgacgacgcactg
aacgcgacccgcgcagccgttgaagagggcgttgttcctggcggcggcgtcatgctgctc
aaggcatccgcagccatcgacgtcgaaggtgacaacgaggaccaggaagctggcatccag
atcgttcgccgcgcactgcaggctccgatccgccagatcgcagacaacgctggtgttgaa
ggctccatcgtcgtcggcaaggtgctcgaaactcgcggtcagtcgttcggctatgacgcc
cagaacgacgagtacggcgacatgctcgaaaagggcatcatcgacccggctaaggttgtg
cgcaccgcacttcaggacgccgcttcgatcgccagcctgctgatcaccaccgaagctgct
gttgctgaagctccgaagaaggacgctggccacagccatggcggcggcggcatgggtgga
atgggcggcatgggtggaatggacatgatgtaa
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