Candidatus Filomicrobium marinum W: BN1229_v1_0311
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Entry
BN1229_v1_0311 CDS
T03856
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
Organism
fil
Candidatus Filomicrobium marinum W
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
CFX00887
UniProt:
A0A0D6JB16
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Position
1:complement(302833..304422)
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AA seq
529 aa
AA seq
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MTTLTFAELGLSPKVQAAVDSSGYTTPTPIQAAAIPVAIQGRDILGIAQTGTGKTASFTL
PMICRLETGRARARMPRSLILAPTRELAAQVAQSFEKYGANNKLNLALLIGGVSMDEQTK
KLDRGVDVLIATPGRLIDHFQRGRVMLMGVEILVIDEADRMLDMGFIPDIEKICKLLPPR
RQTLFFSATMPPEITRLVDQFMNDPMRIEVAKPATTATTITQLFRYCPDGEDWAKREVLR
ELMRSDDVKNAIVFCNRKRDVAILHKSLLKHGFNAGALHGDMDQKSRTETLDKFRSGEIT
ILAASDVAARGLDIPAVSHVFNFDLPWQSDDYVHRIGRTGRAGREGNSTSLVTFEDLKLV
SDIEKITGTTANWIGEPPSEEDMADSSSKKRRRARGQRSPERGRGSGRGAPRPSRRSSKD
EQAVTEQPVMLEETDAKQKVSKPKRARKPDAPPKAAAKTEETASEPIKKTDSTQKRQRAI
AKSSDGSDLVAPAQGFADNIPAFLRRPVRRPSRTATTKTDPARAKVPSE
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
ttgacgacactgacatttgctgagctcggcctgagcccaaaggtccaggcggcggtcgat
agctcaggttatacaacgccgacacccattcaggcggccgctattcccgttgctattcaa
ggccgcgatatactcggtatcgcacaaaccggtaccggcaaaaccgcatctttcactttg
ccgatgatttgccgtcttgagaccggacgagcgcgtgcacgtatgccgcgatccctgatc
ctcgcgccaacccgtgaacttgccgcacaggtcgcacaaagcttcgaaaaatacggcgcc
aacaacaagctcaacttggcgctgttgatcggcggcgtctccatggacgagcagaccaaa
aagctagatcgcggcgtagatgtcctcattgccacgcccggccgcctgatagaccatttt
cagcgcggccgcgtcatgctgatgggtgtagaaatactcgtcatcgacgaagcggaccgc
atgctggatatgggcttcattcccgatatcgagaaaatctgcaaactccttccgccgcgc
cgtcagacgctgttcttctctgcgacgatgccaccagagatcacgcgcctcgtggatcag
ttcatgaatgatcctatgcgcatcgaagtggccaagccggcaaccaccgcgacaaccatc
acgcagctgttccggtattgccccgatggcgaagactgggccaaacgcgaagtcttgcgc
gaattgatgcgctctgacgacgtgaagaacgccattgtcttttgcaaccgaaaacgcgat
gtcgccattctgcacaagtcactgctgaagcacggtttcaatgccggagcgctgcatggt
gacatggaccagaagagccgcaccgaaacactcgataaattccgctctggcgaaatcaca
attctcgcagcgagcgatgtggctgcacgcgggttggatatcccggccgttagccacgtt
ttcaattttgatctgccctggcaatccgacgattacgttcaccgcattggccgaacgggc
cgggcaggccgcgaaggcaactcaacgtccctcgtgacgttcgaggacctgaagctcgtg
agcgacattgaaaagatcaccggaacaacggcgaattggatcggcgaacctccctccgag
gaggacatggccgacagctcttcaaagaagcgccgccgcgcacgcggtcaacgttccccc
gagcgtggacgtgggagcggcagaggagctccaagaccgtcgcgcaggagttcaaaagac
gagcaagccgtgaccgaacaaccggtcatgctagaagaaaccgacgccaaacaaaaggtc
tcaaaaccgaagcgtgcgcgcaagcccgatgccccgcctaaggctgccgccaaaaccgaa
gagaccgcgtcagaacccatcaaaaagaccgacagcacccaaaagcgccaacgcgctatc
gcgaaatccagcgacgggagcgatttggtagcccctgcgcagggcttcgcggacaacatt
ccggctttcctccgtcgcccggtacgtcggccaagccgcacagcgaccacgaagaccgac
ccggcccgtgcaaaggtgccgagcgaataa
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