Candidatus Filomicrobium marinum W: BN1229_v1_0324
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Entry
BN1229_v1_0324 CDS
T03856
Name
(GenBank) D-Ala-D-Ala carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
fil
Candidatus Filomicrobium marinum W
Pathway
fil00550
Peptidoglycan biosynthesis
fil01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fil00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BN1229_v1_0324
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fil01002
]
BN1229_v1_0324
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fil01011
]
BN1229_v1_0324
Enzymes [BR:
fil01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
BN1229_v1_0324
Peptidases and inhibitors [BR:
fil01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
BN1229_v1_0324
Peptidoglycan biosynthesis and degradation proteins [BR:
fil01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
BN1229_v1_0324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
SPOR
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
CFX01019
UniProt:
A0A0D6JBE9
LinkDB
All DBs
Position
1:complement(318748..320217)
Genome browser
AA seq
489 aa
AA seq
DB search
MARNFTRHTGKKASDRTSLYSAVLTVLTLACAILVSDVQAANAEKHAAMAMDANTGKVLH
NSSGDELRHPASLTKMMTLYMAFELIEAGKLSYGTKIRFSAQAASQPPSKLGLDVGESIR
LIDAIKALITKSANDVACAVAEHIGGSETRFARLMTEKARALGMKRTVFKNASGLPNEDQ
VTTARDMLTLAMRLQDDFPKHYELFKTQTFSYRGKTYRNHNRLLGKIRGVDGIKTGYIRA
SGFNLVSSVKRDGKYVVAAVFGGRTSKTRNAEMTSLLYKSLKRASTHQTRKPMLVATPKP
MMRPSIPPRRPVLAEPIEVGRAEPQIAIARVRPNDVVQGRPTPSPAYANRPPQHQPTSEP
PGRAPGTLQDQLALLLARSGVVDDTSGEGSREEPEQNVRGQVQGRVPNGPYQVQVGAFGS
RQEAEQSLEAVIRRTNRLLADYVPITEPVNNGSRTLYRARFAGFGQAAATSTCHELRSLQ
IDCFVTSQR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggccagaaatttcacacgtcataccggcaaaaaagcctcagacaggacgtcactttat
agtgccgttctgaccgttttgacgttggcttgtgcaatcctggtctcggatgtgcaggca
gccaacgccgaaaagcatgccgcgatggccatggacgctaacaccggcaaagtgctgcac
aacagctctggggacgaattgcgtcaccctgcttcgcttacgaaaatgatgacgctgtat
atggccttcgaactcattgaagcaggaaagctcagctacggcacaaaaatccggttcagc
gcgcaggccgccagccaacccccttcgaaactcggcctagacgtcggggaaagcatccgc
ctgatcgatgccatcaaggctctcattacaaagagcgcgaacgatgtggcgtgcgcggtc
gcagaacatatcgggggctccgaaacccgcttcgcccgccttatgacggaaaaggcacgc
gcgcttggcatgaaacggaccgtctttaagaacgcatctggcctgccgaatgaggatcag
gtgacgaccgcacgcgatatgctcacactggcgatgcggcttcaggacgattttccaaag
cactacgagcttttcaaaacgcagacgttctcataccggggcaagacctaccgcaaccac
aataggctcttgggcaagatccgtggcgtcgacggcattaagactggttacatccgcgct
tccggtttcaatctcgtttcgtcggtaaagcgggacggtaaatacgtcgtcgcagcagta
ttcggcgggcgcacatccaagacgcgcaacgccgaaatgacgagcctgctttacaagtcc
ctcaagcgagcttctacgcaccagacgcgtaagccgatgttggtcgctacacctaagcct
atgatgcgcccatcaattccgccacgccgtcctgttcttgctgaacccattgaggtcgga
cgcgccgaacctcagatcgcgatcgcgcgcgtgcgtccgaacgatgttgtgcagggccgc
cccacgccatcgcccgcctatgcgaatcgccctccacagcatcaacccaccagcgaacca
cccggacgcgccccaggcacgctgcaggatcaattggctctattgctcgcccgtagcggc
gtcgtggacgatacaagcggcgaagggtcacgagaagaaccagagcaaaatgtgcgaggc
caggtgcaaggtcgggtaccgaacggcccttatcaggttcaggtgggcgcctttggatca
cgtcaagaagccgaacagagcctggaagccgtaatccgacggaccaacagactgctcgcc
gactacgttcccattacagaacccgtaaacaatggttcacgaaccctctaccgcgcacgc
tttgcaggctttgggcaagcggcggcaacgtcaacgtgccacgaactacgaagccttcaa
atcgactgcttcgtcacgagccagcgctag
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