Candidatus Filomicrobium marinum W: BN1229_v1_0465
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Entry
BN1229_v1_0465 CDS
T03856
Name
(GenBank) Pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
fil
Candidatus Filomicrobium marinum W
Brite
KEGG Orthology (KO) [BR:
fil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fil03009
]
BN1229_v1_0465
Enzymes [BR:
fil01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
BN1229_v1_0465
Ribosome biogenesis [BR:
fil03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BN1229_v1_0465
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
YuA_Gp49
RNF216_N
Motif
Other DBs
NCBI-ProteinID:
CFX02702
UniProt:
A0A0D6JBR7
LinkDB
All DBs
Position
1:442745..443731
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AA seq
328 aa
AA seq
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MSDPVESIPVTPDEVGLRLDRWFKIHFPDVTYGYLQKLLRSGQVRVDSRRVLANARLEAG
ERVRVPKAVRQPPRAKPSVKPPPGLSKADRDLIEGMILFEDDHVVLLNKPFGLAVQGGTG
TKRHIDGLLAGMVDRFGDRPRLVHRLDRDTTGVLLIAKHRDAAAKLGRIFQTRSAAKTYW
ALVNGVPKPVQGKVEAALVKASGPDGDKVRKARPGEQDVAMHATTHYSVIDRVGQKAAWV
SLKPVTGRQHQLRAHMALIGHPIVGDNKYDGDKNLPAENIENKLHLHARRLVLPHPFEKT
KIDVTAPLPDHMLRSWELLGLDVRQFER
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccccgttgaaagcatccccgtgaccccggacgaagttgggttgcggctcgac
cgctggttcaagatccactttccggatgtgacctacggctaccttcagaagctgttgcgg
tccgggcaggtgcgcgtggacagccgccgtgttctggcgaatgcacggcttgaagcgggg
gaacgtgtcagggtaccaaaggcggtccgtcaacctccgcgcgccaagccatccgtgaag
ccgccacctgggctgtcaaaggctgatcgcgatctcattgaggggatgattctgttcgag
gatgatcacgtggtcttgctcaacaagccgttcgggcttgccgtccagggtgggacggga
acgaagcgacacattgatggtcttctcgccggcatggtggatcggttcggagaccggccc
cgattggtgcatcgtctcgaccgcgatacgacgggggtgttgctgattgcgaagcatcgg
gacgcagcagccaagctgggtcgcatttttcaaacgcgttccgcagcgaaaacatactgg
gcgctcgtaaatggcgttcccaagcccgtgcagggtaaggttgaagcagcgctggtcaag
gcttcgggccccgacggtgacaaggtgcgcaaggcacggcctggcgaacaggatgtggcc
atgcatgccacaacgcattattccgttattgatcgggtagggcaaaaagctgcctgggtt
tcactgaagccggtcacaggccgtcagcatcagctgcgtgcacacatggcccttatcggt
catccgatcgttggcgataacaaatacgacggcgacaagaacctgcccgccgagaacatc
gagaataagctgcacttgcacgcgcgcagactggtgctcccgcacccgtttgagaagacc
aagatcgatgtcaccgcgcctctgccggatcatatgctgcggagctgggaactccttgga
ctcgatgtacggcagttcgagcggtga
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