Candidatus Filomicrobium marinum W: BN1229_v1_0506
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Entry
BN1229_v1_0506 CDS
T03856
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
fil
Candidatus Filomicrobium marinum W
Brite
KEGG Orthology (KO) [BR:
fil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fil03032
]
BN1229_v1_0506 (gyrA)
03400 DNA repair and recombination proteins [BR:
fil03400
]
BN1229_v1_0506 (gyrA)
Enzymes [BR:
fil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BN1229_v1_0506 (gyrA)
DNA replication proteins [BR:
fil03032
]
Prokaryotic type
DNA Topoisomerases
BN1229_v1_0506 (gyrA)
DNA repair and recombination proteins [BR:
fil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BN1229_v1_0506 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
CAP18_C
Motif
Other DBs
NCBI-ProteinID:
CFX03171
UniProt:
A0A0D6JAL8
LinkDB
All DBs
Position
1:480167..483034
Genome browser
AA seq
955 aa
AA seq
DB search
MADNSDIPNQGPDGPRDIRPITIVEEMKRSYLEYAMSVIVSRALPDVRDGLKPVHRRILY
GMHEMGLEWNKSYRKSAKVVGEVMGNYHPHGDSAIYDALVRLAQDFSMSLPLIDGQGNFG
SIDGDPPAAMRYTECRLEKVAQFLLDDLDKDTVEFQENYDGSEDEPTVLPAKFPNLLVNG
AGGIAVGMATNIPPHNLGEVIEACLAHLDTPAITIDELCQIVKGPDFPTGGLILGRGGIT
SAYHKGRGSIIMRARVEVEEIRKDRQALIVTAIPYQVNKRVLIEKIADAVREKRVEGISD
IWDETNREGMRIVIELKRDAVADVVLNQLWRYSDLQTSFGANMLAINGGRPEQLNLKDMI
EAFTAFREEVVTRRTKFLLNKARDRAHVLVGLAIAVANIDEVINLIRRAASPAVAKEELM
TRDWPARDVAPLVELIADPRHRVQADGTYKLSEEQAKAILELRLARLTALGRDEIGDELK
KIGEEIKEYLEILSSRVRIVEIIKGELSDIRDQFAVPRRTEIVDIEGEVDDEDLIQREDV
VVTVTHKGYIKRVPLTTYRAQRRGGKGRSGLSTKDEDFVTQLFMASTHTPVLFFSSRGMC
YRMKVWRLPVGTPQSIGKALVNLLPLEQGEWITSILPLPEDPETWGSLQLMFATRSGNVR
RNELADFENINRNGKIAMKLEEGDQIVHVGICSPTDNVLLTTAGGQCIRFPVEGVRVFKG
RDAVGVRGIRLDAEDRVISMAILAPMDATPAERAAYLKLAAAHRRAGDADAEEAEEQAAN
VAAEEGAETLETEELSAQRFEEMAATEQFVLTLSERGYGKRSSSYEYRTSGRGGKGIVAM
VVNERNGPLCASFPVENSDQIILVTDAGQLIRTLVDQVRIAGRNTQGVRIFRTDADEKVV
SVERIPEVANGDNGDGDEDVPPSDDVVVGEAGPIEEAGPTDVASDGDGAGGETES
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
gtggcggacaacagcgacatcccgaatcaagggcctgacggtccgcgcgatattcggccg
attactatcgtagaggaaatgaagcgctcgtaccttgagtacgcgatgagcgttatcgtc
tcccgcgcgctgccggacgtgcgcgatgggctcaagcccgttcatcgccgtatcctttac
ggcatgcacgagatgggccttgaatggaacaagtcctatcgtaagtcggcgaaggtcgtc
ggcgaagtgatgggtaattatcacccacatggcgacagcgcgatttatgacgcgcttgtg
cgtttggcgcaggacttttcgatgagcctgccgctcatcgacggccaaggtaacttcggc
tcgatcgacggtgatccgccggctgcgatgcgctatacggagtgccgtctcgagaaggtc
gcccaattccttctcgacgacctcgataaggacacggtcgaattccaggagaactacgac
ggttctgaagacgaaccgacggtgcttcccgcgaagttcccgaacctgctcgtcaatggc
gccggcggcattgctgtcggtatggcgacgaatatcccaccccacaatctcggagaagtc
atcgaggcttgcctcgcccatctcgatacgccggccataacgatcgatgagctgtgccag
atcgtgaaaggcccggattttccgacgggcggtctgatccttggccgtggaggtatcacg
tctgcctatcacaagggccgcggttcgatcatcatgcgcgcgcgtgttgaggtcgaggag
atccgcaaagatcgccaagccttgatcgttacggccattccctatcaggtcaacaaacgc
gttctgatcgagaagatcgcagacgcggttcgcgagaagcgcgtcgagggtatctctgat
atctgggacgaaaccaaccgcgaaggcatgcggatcgtcattgaactgaagcgcgacgcg
gtggccgatgtcgtgctcaatcagctctggcgctattcggatttgcagacgtcgttcggt
gccaacatgctggcgatcaacggcggtcgccccgagcagcttaacctcaaggacatgatc
gaggcgttcacggcgttccgcgaggaagtcgttacgcggcgcacgaagttcttgctcaac
aaggcgcgtgatcgtgcgcacgttcttgtcggtttggctatcgctgtggccaatattgat
gaggtcatcaatctgatccggcgcgcggcctcaccggccgtcgctaaagaagaacttatg
acgcgcgattggccggcgcgggatgtggcgccgctggttgagttgatcgctgatcctcgc
caccgtgttcaagctgatggcacctacaagctgtcagaagaacaggcgaaggcgattctc
gaattgcggcttgcgcgcctgacggctctcggtcgcgatgagattggcgacgaactcaaa
aagatcggcgaggaaatcaaggagtatcttgagatcctgtcgtcgcgcgtgcgtattgtt
gagatcatcaagggtgaactctcagacatccgggatcagtttgcggttccgcgccgaacc
gagatcgtcgacattgagggtgaggtcgacgatgaagacctcattcagcgcgaagacgtc
gtcgttaccgttacgcacaaaggctacatcaagcgtgtgccgctcacgacgtatcgtgcg
cagcgccgtgggggcaaagggcgctcggggctttcgacgaaggacgaggatttcgttacg
cagctctttatggcgtcaacacatacgccggtgctgttcttctcttcgcgcggcatgtgc
taccgaatgaaagtctggcggttgcctgttggtacgccgcagtccatcggcaaagcgctc
gtaaatcttctgcctctggagcagggcgaatggattacgtcaattttgccgttgccggag
gatcctgaaacgtggggatcgctgcagctgatgtttgcgacgcgcagcggcaacgtgcgg
cgtaacgaactcgccgatttcgagaacatcaatcgtaacggcaagatcgcgatgaagctt
gaggagggcgaccagatcgtccacgtcgggatttgttcgccaacggacaacgtgctgctg
acgacagcgggcgggcagtgcatccgtttccccgttgaaggcgtgcgcgtctttaaaggc
cgggatgcggtgggcgttcgcggtatccggctcgatgcagaggaccgggtgatttcgatg
gcgattttagccccgatggatgccacgcctgcggagcgcgcggcctatcttaagctcgct
gccgcgcatcgccgtgccggagatgccgacgccgaagaagctgaagagcaggcggcgaat
gttgcagcggaagagggcgcggagacgttggaaactgaggagctatcggctcagcggttt
gaagagatggcggcgacagaacagtttgttcttacgctatccgaacgtgggtacggcaag
cgttcctcgtcctatgagtatcggacgtcgggtcgcggcggcaaaggcatcgtggctatg
gtcgtcaatgagcgcaacgggccgctctgtgcatcattccccgttgagaattccgatcag
atcattcttgtgacggacgccgggcaattgatccggacgctcgttgaccaggttcggatt
gctggacgaaacacacaaggcgttcgcattttccgcacggatgctgatgagaaagtggtt
tctgtcgagcgcatcccggaggtcgccaatggtgacaacggggatggggacgaagatgtg
cctccgtctgatgatgtagttgtcggagaggctggtcccatcgaagaggctgggcccact
gatgtcgccagtgatggcgatggtgccggtggtgaaacggagagctga
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