Candidatus Filomicrobium marinum W: BN1229_v1_0926
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Entry
BN1229_v1_0926 CDS
T03856
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
fil
Candidatus Filomicrobium marinum W
Pathway
fil03030
DNA replication
fil03430
Mismatch repair
fil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BN1229_v1_0926
03430 Mismatch repair
BN1229_v1_0926
03440 Homologous recombination
BN1229_v1_0926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fil03032
]
BN1229_v1_0926
03400 DNA repair and recombination proteins [BR:
fil03400
]
BN1229_v1_0926
Enzymes [BR:
fil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BN1229_v1_0926
DNA replication proteins [BR:
fil03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BN1229_v1_0926
DNA repair and recombination proteins [BR:
fil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BN1229_v1_0926
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HP_1247_M
Motif
Other DBs
NCBI-ProteinID:
CFX07978
UniProt:
A0A0D6JD19
LinkDB
All DBs
Position
1:complement(858569..859609)
Genome browser
AA seq
346 aa
AA seq
DB search
MVAIKSHQSASFLKSPDAKITALLFYGTDAGLVSERARQAADAWAKRENPPGEILRVDEM
DLDGDPGRLADELLTVAMFGGRKIVRTSTGRRINANLLKPLVAETALPSVLIVEAGNLKP
TDALRKMFEQPAHAAAIACFPDEERDLGAVVDEEMKAAGLTISAPARDSLVARLGADRAM
SRGEIEKLILYCSGRGKVEVEDVEAIVGDASELTIDRIVLAAAGGQGDRAVNEFSRAIAA
GESAQAIILALQRHFMRLHRVCTQIDAGRPVADVMRSFRPPLHFKQKDALTAQARMWTVQ
RLAQALGAIQAAAKTARHNGALEDIVAERLVLSLTRLARASGYSGR
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggtcgctattaaaagtcatcaatctgcgagttttctgaaatcgcccgacgccaagatc
acggcgttgctcttctacggcacggatgccgggcttgtctcggaacgcgcccgacaggcc
gcggatgcatgggcgaagcgcgaaaacccacccggtgaaattttaagagttgatgagatg
gatctggacggagacccaggtcgtcttgcggatgaacttctgacggtcgctatgttcggc
gggcgtaaaatcgttcgtacgagcaccggacggcgtatcaacgccaatctgctcaaaccg
cttgtcgctgagacagctctgcccagcgttttgatcgtagaggcaggaaatctgaagccg
acggatgcgcttcgaaagatgttcgagcagcctgcacatgcggccgcaatcgcgtgtttt
ccggatgaagaacgcgatcttggcgcggtggtcgatgaggagatgaaggcggccgggttg
acgatttccgcaccggctcgtgacagccttgttgctcggcttggcgcggatcgggcgatg
tcgcgcggagaaatagaaaagctgatcctttattgctcggggcgtggcaaagttgaagtt
gaagatgtcgaggcgatcgtgggggacgcctctgaacttacaattgatcgtattgtgctc
gctgccgcgggtggacaaggtgaccgggctgtcaatgaattcagtcgggcgatagccgca
ggagaaagcgcgcaagctatcatcctcgccctccaacggcattttatgcgactgcatcgc
gtgtgtacgcagattgatgccggccggcccgttgccgatgtcatgcggagttttcggcca
ccgctccatttcaagcagaaagatgcgctcacggcacaagcgcgtatgtggacggtgcag
cggttggcgcaggctcttggggcgattcaagccgcggccaagaccgcgcggcacaatggt
gctctggaagatatcgtcgctgagcgcctcgtgttgtcgctgacccggctggcgcgtgcg
agcggttattcgggccgctaa
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