Candidatus Filomicrobium marinum W: BN1229_v1_1068
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Entry
BN1229_v1_1068 CDS
T03856
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fil
Candidatus Filomicrobium marinum W
Pathway
fil03030
DNA replication
fil03430
Mismatch repair
fil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BN1229_v1_1068 (dnaQ)
03430 Mismatch repair
BN1229_v1_1068 (dnaQ)
03440 Homologous recombination
BN1229_v1_1068 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fil03032
]
BN1229_v1_1068 (dnaQ)
03400 DNA repair and recombination proteins [BR:
fil03400
]
BN1229_v1_1068 (dnaQ)
Enzymes [BR:
fil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BN1229_v1_1068 (dnaQ)
DNA replication proteins [BR:
fil03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BN1229_v1_1068 (dnaQ)
DNA repair and recombination proteins [BR:
fil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BN1229_v1_1068 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
CFX09876
UniProt:
A0A0D6JDE1
LinkDB
All DBs
Position
1:989705..990424
Genome browser
AA seq
239 aa
AA seq
DB search
MQREIVLDTETTGLDHARGDRIIEIGCIELLNRIPTGREFHCFINPERDVPAEAEAVHGL
STAFLADKPLFAAVADEFIDFIGNDVLVIHNATFDIGFLNMELERLAKPRISHDRVVDTL
ALSRRKHPGGVHNLDALCKRYGIDNSKRTKHGALMDSLLLAEVYVELLGERQANLQLGRS
NANRASASAASGGAVVAAKRPAPLPSRLTADDVAAHRSFIESLGETALWRRYLNGQTET
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgcgaaatcgttctcgataccgaaacgacgggtctcgaccacgcgcgtggtgat
cgcataatcgaaattggctgtatcgaacttctcaatcgcatacctacagggcgcgaattc
cattgcttcataaaccctgagcgggacgttccagcagaagcagaggctgtgcacggtcta
tcgacggcgttcctggccgacaagcccctatttgctgctgttgccgatgagttcatcgac
ttcattggcaacgatgtgcttgtcatccacaacgccaccttcgacatcggcttcctgaat
atggagctcgagcgattggcgaagccgcggatcagccacgaccgtgtagttgacacgttg
gccctgtcgcgtcgcaaacacccaggtggcgttcacaatcttgacgcgctctgtaagcgt
tatggcatcgacaactccaagcgcacgaaacacggcgcgcttatggactcgctcctgctg
gcagaggtctatgtcgagttacttggtgaacggcaggctaatctgcaacttggccgcagc
aatgccaatcgcgcgtcggcttcagccgcgagcggcggagccgttgtagccgccaagcgt
ccagcccctttaccatcgcggctgactgccgacgacgtggcggcgcatcgctcgttcata
gaaagcctgggagaaacggcgctatggcgccgctatctcaatggccagaccgagacttga
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