Candidatus Filomicrobium marinum W: BN1229_v1_1207
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Entry
BN1229_v1_1207 CDS
T03856
Symbol
bzdR
Name
(GenBank) Shikimate kinase
KO
K15546
XRE family transcriptional regulator, aerobic/anaerobic benzoate catabolism transcriptional regulator
Organism
fil
Candidatus Filomicrobium marinum W
Brite
KEGG Orthology (KO) [BR:
fil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fil03000
]
BN1229_v1_1207 (bzdR)
Transcription factors [BR:
fil03000
]
Prokaryotic type
Helix-turn-helix
XRE family
BN1229_v1_1207 (bzdR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SKI
HTH_3
HTH_31
AAA_33
AAA_18
HTH_26
AAA
HTH_19
AAA_25
AAA_28
DUF6626
AAA_22
HTH_25
Cytidylate_kin2
IPT
AAA_14
TsaE
ABC_tran
dNK
Motif
Other DBs
NCBI-ProteinID:
CFX11799
UniProt:
A0A0D6JD02
LinkDB
All DBs
Position
1:complement(1124120..1125097)
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AA seq
325 aa
AA seq
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MRKQENNLQPSEPRRGDARENEAYLRLVGERVRNLRAQLGMARKALSQASGVSERYLAEL
ERGTGNASLLVLRNIASALGARIEDLASEQDDQAVDTSLGFDQLEQLSPSDASPQKPVRR
WNTNGTPLGRIALVGLRGAGKTTLGHALAKAIGVPCIALDREIERASGMEVADVLAVHGE
AVYRRLERNCLATVVETVPRAVIKTGGGIVLEPETMDLMFSGCFVIWITASSNELFARAR
GSAALPINGSGRHAKAVLEAALAEREPLYARADAVIDTTGKSVDEALSELLRIVQAAQPR
ENATQARSTTLDRLKEDRRDIECAS
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaagcaagagaataacctgcaaccgtccgaacctcggcgtggtgacgcccgcgaa
aacgaggcgtacctgaggcttgttggagaacgggtgcgaaatttacgtgcacagctcggc
atggcccgaaaagctctttcgcaggcttccggcgtttccgaacgctatctcgccgagctt
gaacgcggcacaggcaacgcctctctgctcgttctacggaatattgccagcgcgctcgga
gcgcggatcgaagatcttgccagcgagcaggatgatcaagccgtcgacaccagcctcggc
ttcgatcagctagagcaactgagcccaagcgacgcgtcaccgcagaagccggttcgccgt
tggaacaccaacggcacgccgctcggtcggatcgcattggtcggccttcgcggagccgga
aaaaccacgctcggacacgccctggccaaggccatcggcgtaccgtgcatcgcccttgac
cgggaaatcgagcgcgctagcggcatggaagtcgccgacgtccttgccgtgcacggcgag
gccgtctatcggcgccttgaacgcaactgccttgcgaccgtggtcgaaacggttccccgc
gccgttatcaaaacgggcggtggcatcgtgcttgagcccgagaccatggacctcatgttc
tcaggctgcttcgtcatctggatcacggcatcgtccaacgaattgtttgcgcgtgcacgc
ggaagcgcagctctgcctatcaacggttccggacgccacgctaaggccgttttagaggca
gcgctggccgagcgtgagcctctctatgcccgcgcagatgcagtgattgatacgaccggc
aagagcgtcgacgaggcgcttagcgagcttctgcggatcgtgcaggctgcgcaacctcgt
gagaacgcaactcaggcgcgcagcacgacgcttgatcgcctcaaagaggatcgccgcgac
atcgagtgtgccagctaa
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integrated database retrieval system
