Candidatus Filomicrobium marinum W: BN1229_v1_1212
Help
Entry
BN1229_v1_1212 CDS
T03856
Name
(GenBank) exported protein of unknown function
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
fil
Candidatus Filomicrobium marinum W
Pathway
fil02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fil00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BN1229_v1_1212
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fil02000
]
BN1229_v1_1212
Transporters [BR:
fil02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
BN1229_v1_1212
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_8
CbiG_N
Motif
Other DBs
NCBI-ProteinID:
CFX11859
UniProt:
A0A0D6JD08
LinkDB
All DBs
Position
1:complement(1129578..1130900)
Genome browser
AA seq
440 aa
AA seq
DB search
MFRFRFSIAVAMLFAAGVLPTFAQSPSSNETAQQATPSDGQNAAKTGARSDVQPENDTAA
TPSADVEAPAPTKDVGSSTSSQQKADPAVVAEAPEKRFTVSTWGGAYGQAQKKAVAVPFG
RSHDVAIEVLTDGDGKALRGDVVELNAAALDAACQSGELAKVDASLLTPAPDTADTAQQD
FIADGVHDCGPASMVWSAVFAVNENALKAGTPNVLQDVFDTTRFPGRRVLIKSPRYLLEM
ALIADGVAPEVIYQHLSTDEGLERAFAKLDSLGKDLVWKETAKQTEEDLMNGSAVFAQTF
NGQAFYAAAYGAPIRIIWDGQVYTMSFWAIPADGSSQDIAKEFVGFATAPKQLAAVAEEI
AYGPARVSATALVKQHASIGLDLTPYLPTRPENMARAVPFDAAWWDENGTQIDASFATWV
EEREAAMRPKPMPKPVRKPE
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgatttcgtttttccattgccgtcgcgatgttatttgccgctggcgttctgcca
acctttgcacaaagcccgtccagcaacgaaacagcgcagcaggctacgccaagcgatggc
cagaacgcagcgaagacaggggcgcgttctgatgttcaacccgagaatgacacagccgct
acaccgtcagcggacgtagaggctcccgcgcccacgaaggacgtagggtcgtcgacatct
tcccagcaaaaggctgatcctgccgtggtggccgaagcgccagagaagaggttcacggtg
agcacgtggggcggcgcctatgggcaagcccagaagaaggccgttgccgtacccttcgga
cgttctcacgacgtcgccatcgaggtcctgacggatggagacggcaaagcgctcagaggt
gacgttgtcgaactcaacgcggcagccctcgatgctgcgtgccaatccggtgaactcgcc
aaagtcgacgcctctttgcttacccccgctccggatacagccgacacggcgcaacaagac
tttatagcggatggtgtgcacgactgtgggccagcctcaatggtctggtccgctgtcttc
gcggtcaatgagaacgctttgaaagccggtacaccgaatgttctgcaggacgtgttcgac
acaacccgttttcccggtcggcgggtacttattaaatcgccgcgctatcttttggaaatg
gcccttatcgccgatggcgttgcgccggaagttatttatcagcacctatcgaccgatgaa
ggtctagagcgtgcatttgccaagctcgatagccttggcaaggatctcgtgtggaaggag
acagcgaaacaaacggaagaagacctgatgaacggttcggcggtctttgcgcagacattc
aacgggcaggccttttatgcagcagcctacggcgcgccaatcagaattatttgggacggt
caggtttacactatgagcttctgggccattccagccgacgggtcttcacaagacatcgcg
aaagagttcgttgggttcgctacggccccaaagcagttggcggctgtcgcggaggagatt
gcctacggaccagcgcgcgtttcagcgaccgcactcgtgaagcaacatgccagtattggg
cttgatcttacgccttacctcccgacgcgccctgaaaatatggcgcgcgcagtgcctttt
gacgcggcgtggtgggacgagaacggaacacagattgatgcgagcttcgccacatgggta
gaagaacgagaagctgccatgcgccccaagccgatgccaaagccggtgcggaagcctgag
taa
DBGET
integrated database retrieval system
