Candidatus Filomicrobium marinum W: BN1229_v1_1279
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Entry
BN1229_v1_1279 CDS
T03856
Name
(GenBank) Ligand-gated channel protein
KO
K02014
iron complex outermembrane recepter protein
Organism
fil
Candidatus Filomicrobium marinum W
Brite
KEGG Orthology (KO) [BR:
fil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fil02000
]
BN1229_v1_1279
Transporters [BR:
fil02000
]
Other transporters
Pores ion channels [TC:
1
]
BN1229_v1_1279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
CFX12700
UniProt:
A0A0D6JCS3
LinkDB
All DBs
Position
1:1198645..1200876
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AA seq
743 aa
AA seq
DB search
MRCSVHAAATAAVFLGLSTAETNAQSTTKPDNIDLPPIVVEQVEPKPASLATKPAQSNQA
VSAASPASEPADVSLSNMPLALTVGQRSGSLTVPNTVEATAEIQRTPGAVEVVSDKAYKA
STPSATIKDALDYVPGVFVQPKWGDDTRLSIRGSGLSRNFHLRGVQLYMDGIPINTADGY
GDFQEIDPTAYRYIEVFKGANALRFGANSLGGAINFVMPTGYDADRFGARVDVGSFGFRK
FATGSGGVYGAADYFITGTWQEQDGYREHSDGESVRGSANVGYRLSSNVETRFYLNANDV
EQRIPGSVTRTAALSDPKAAAANNILQDYQRNIETVRLANKTSVRLDDNTTVEFGAFYVD
RKLDHPIYQWLDYAYQDAGGFVRAVDAREIGGHANRFIFGVNIHGGELDNKQFANIGGQK
GALLSSSLDESFNVSTYVENTFYALPDVGLVTGLQYLHAKRERRDRFFSDPPSWGVPDAN
PDDSGVRTYDLLSPKVGILWDVDPGWQFFANVSRSAEAPSFGENSFTSAAASNIEAQRAT
TFEIGTRGRREDYRWDFAIYRMNIDNEFQCLETGNTGSCTQVNLDKTIHQGVELGGGAAL
LKSAFVHRDRLWLNAAYTFNDFRFDDDPVFGNNELPGAPRHFVRAELLYQHPSGFYVGPN
VEWVPEAYYADSANSLETKAYALLGAKIGFDDGGPISAYIEGRNLTDETYIASTSIATRA
DASSALFEPGNGRAIYAGVQVKW
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgcgatgttccgtgcacgcagccgcgacggctgcggtattccttggcttgtcgacggcc
gagaccaacgcacaatccacgacgaaacccgacaatatcgatctaccgcccatcgttgtc
gagcaggtggagcctaaaccagcatccctggctacgaagccggcacaatcaaaccaagcg
gtatctgctgcgtcaccagcgtcagagcctgcggacgtcagtttgtccaatatgccgctg
gcgctgactgttggacagcgctccggcagtctgaccgtaccgaacacggtagaagccact
gcggagattcagcggacgcccggcgctgtggaggtcgtctctgacaaggcctacaaggcc
tcgacgccgtccgccacgatcaaggatgcgctcgactacgtgcccggcgtgttcgtgcaa
ccgaagtggggtgacgacacacgcctctccatccgcggttctggcctctcacgaaatttc
cacctgcgcggcgtgcagctgtacatggatggaattcccatcaacaccgccgacggctac
ggtgattttcaagaaatcgacccgacagcctaccgctatatcgaggtcttcaagggggct
aacgcgctgcgtttcggtgccaactcgctcggcggcgcaatcaattttgtgatgccgacg
ggatatgacgcagaccggttcggtgcgcgggtcgatgtcggcagcttcggtttccgcaaa
ttcgcgaccggttccggcggcgtctatggggcagccgactatttcatcacaggcacttgg
caggagcaggacggctaccgagagcatagcgacggagagagtgtcaggggctccgccaat
gttgggtatcgcctgtcgagcaacgttgaaacgcgcttctatttaaatgccaacgacgtc
gagcagcgtattccgggcagtgtcacgcgaactgccgcgctgagcgatccgaaggcagcc
gcagccaacaacatcttgcaggactatcagcgcaacattgaaacggttcgccttgccaat
aagacgtcggtacggctcgacgacaacaccacggtggagttcggcgccttttacgtcgat
cgcaaactcgatcatccgatctatcagtggctcgactatgcatatcaggacgcaggtggc
ttcgtgcgagctgttgatgcgcgcgagattggtggtcatgccaaccgcttcatttttggt
gtcaacattcacggcggcgagctggacaacaagcaattcgcgaatatcggcggacaaaag
ggcgccctgctgtcgagttcgctggatgaaagcttcaacgtctcaacctacgtggagaat
accttctacgccctgccggacgttggtctggtcacggggctgcaatatctccatgccaag
cgcgagcgtcgcgatcgcttcttctctgatcctccgtcttggggcgtcccagacgcaaat
ccggatgactcaggtgtgcgaacctatgatcttctcagccccaaggtcggaatcctttgg
gatgtcgatcctggctggcaattttttgccaacgtctcgcggagcgccgaggcaccatcc
ttcggagaaaatagcttcacgtcagccgcggcctcaaacatcgaagcccaacgcgcgacg
accttcgagatcgggacgcgcgggaggcgcgaggactacaggtgggacttcgcgatctac
cgcatgaacatcgacaacgagtttcaatgtcttgagacgggaaataccggatcatgcacc
caggtcaatctcgataagacgatccatcagggtgtcgaattgggcggcggtgcagcgcta
ctcaagagtgcattcgtgcaccgtgacaggttgtggctgaacgccgcctacaccttcaac
gacttccgcttcgatgacgatcccgtcttcggaaacaacgagcttcccggcgcgccccgt
cacttcgtgcgtgccgaactgctctaccagcaccccagcgggttctacgtcggacccaac
gtcgaatgggtcccggaagcctactatgccgacagcgcaaactcgttggaaacgaaggct
tacgcgctcttaggggccaagatcggtttcgacgatggcggcccgatctcggcctacatc
gaaggccgcaatctcacagacgaaacgtacatcgccagcaccagtatcgcgacgcgtgct
gatgcatcgagcgcgcttttcgagcctggcaacggtcgcgccatctacgccggtgtgcag
gtgaaatggtga
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