Candidatus Filomicrobium marinum W: BN1229_v1_1335
Help
Entry
BN1229_v1_1335 CDS
T03856
Symbol
dapE
Name
(GenBank) Succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
fil
Candidatus Filomicrobium marinum W
Pathway
fil00300
Lysine biosynthesis
fil01100
Metabolic pathways
fil01120
Microbial metabolism in diverse environments
fil01230
Biosynthesis of amino acids
Module
fil_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
fil00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BN1229_v1_1335 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fil01002
]
BN1229_v1_1335 (dapE)
Enzymes [BR:
fil01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
BN1229_v1_1335 (dapE)
Peptidases and inhibitors [BR:
fil01002
]
Metallo peptidases
Family M20
BN1229_v1_1335 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
CFX13432
UniProt:
A0A0D6JE64
LinkDB
All DBs
Position
1:complement(1261357..1262532)
Genome browser
AA seq
391 aa
AA seq
DB search
MSADLPTDVTRLTQALIRCPSVTPAEGGALTLLENVLTELGFVCHRLTFSEPGTPDIENL
YARIGSSGPNLCFAGHTDVVPPGEEDAWSVPPFAGEIRDGILFGRGAVDMKGAIACFVSA
AAAYLAQSDTQRRGAISLLITGDEEGPAINGTVKVLDWLKQQGEQIDACIVGEPSNPRRI
GDEIKVGRRGSLNGEIIVNGRQGHSAYPALADNPVPKLARIIDRLSVLPLDEGSERFERS
NLEVTIISVPNTVTNVIPGQARAAFNVRFNDNWTRERLEDAIRSCCEASAAEVEADMRLT
FSFSGDAFCTEPGPLLDTLVAAVRDVSGVTPALTTGGGTSDARFIKNACPVIEFGLVNAT
IHKVDEHVPVSDLSALTAIYTRFLERFFAAA
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgatctgccgactgacgttacccgtcttactcaggcgttgatccgttgcccg
agcgtaaccccggctgagggcggtgcgctgacgctattggagaacgttctcaccgaactt
ggattcgtctgccaccgtctcacgttttcggagcccggcacgccggatattgaaaacctc
tatgcacggatcggaagcagcggaccgaacctctgctttgccgggcacacggatgtcgta
cctcccggcgaagaagatgcctggagcgttccaccctttgcaggcgaaattcgtgacggc
attcttttcggtcgcggcgccgtcgacatgaagggtgcaatcgcctgcttcgtttctgcg
gcggcggcctaccttgcgcaatcggacacccaacgtcggggggccatttcgctcctcatc
acgggagacgaagaaggaccggcgatcaacggcacggtcaaagtgctcgactggctcaag
cagcagggcgagcagatcgatgcctgcatcgtcggggagccgtccaatccgcgccgcatt
ggcgatgagatcaaagtcggacggcgtggatcactcaatggcgaaatcattgtcaacggc
cggcaaggacacagcgcttatcctgcgttggccgacaatcccgttcccaagctcgcgcgc
atcatcgaccggctgtcggtgcttccgctcgacgaaggcagtgagcggtttgagcgctcc
aatctcgaggtcaccatcatttcggtccccaataccgtgacgaacgtcataccggggcag
gcgcgcgcggccttcaatgtgcgtttcaacgacaattggacacgcgaacgtctggaagac
gctattcgtagctgttgcgaagcaagcgcggcagaggtcgaggccgatatgcggcttacg
ttctccttttcaggcgacgccttctgcactgagccgggaccgttactcgacacgctggtt
gcagcggttcgcgacgtcagtggggtaacgcctgcgcttactaccggcggcggtacgtcc
gatgcgcgcttcatcaagaacgcgtgcccagtgatcgaattcggcctcgtcaacgccacg
atccacaaagtcgacgagcacgttccggtcagcgacctctcggctcttaccgccatctac
acgcgcttcttggagcgatttttcgcggccgcctaa
DBGET
integrated database retrieval system
