Candidatus Filomicrobium marinum W: BN1229_v1_1491
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Entry
BN1229_v1_1491 CDS
T03856
Symbol
sbcD
Name
(GenBank) Nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
fil
Candidatus Filomicrobium marinum W
Brite
KEGG Orthology (KO) [BR:
fil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fil03400
]
BN1229_v1_1491 (sbcD)
DNA repair and recombination proteins [BR:
fil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BN1229_v1_1491 (sbcD)
Archaeal homologous recombinant proteins
BN1229_v1_1491 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
Metallophos_3
Cytochrom_B558a
Motif
Other DBs
NCBI-ProteinID:
CFX15383
UniProt:
A0A0D6JEK1
LinkDB
All DBs
Position
1:complement(1429270..1430514)
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AA seq
414 aa
AA seq
DB search
MRIIHTADWHIGQTLRGYARDHEHRAVLDELVGIVTEREVDALIIAGDVFDSQNPSGEAQ
RLFYETLVKLHQARPSLRIVVTAGNHDAAGRLEAPRVLLGGIGVHVVGNVRRINGLIDIA
RHVVPLPSTTREIAAHVLAVSYPTPACLPTLPRQKEEDGSSIVRATQALYEDLMDAARPI
TRGLPLVMTGHLHVAGGTESEGAERRILVGGQHAVAPDIFPADACYVALGHLHKPQTFKG
DRVRYSGSLIPLSATEQPYRHGVTLLTLGDRGVTSIEHIELTRPVPFLRLPEKGDIRLDD
LGDHFKALDLDPDLPINQRPFVHVRLNHEGLSAGFRAEADRVAESFPVRLVDLKVSPRPD
APTDTVASGPIVRLSERAPEDLFVTAFQRTHGGEPDASHRDVFHRALANANAEV
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcattcacacagctgactggcacatcgggcagacgctgcgagggtatgcacgc
gatcatgagcatcgcgccgtgctcgacgagcttgtcgggatcgtcaccgaacgtgaggtc
gatgcgctgatcatcgccggcgacgtgttcgatagtcagaacccttccggcgaagcacag
cggctgttttatgagaccctcgttaagttgcatcaagcacggccgagcctgcgcatcgtc
gtgaccgcaggaaatcacgacgcggcaggccgattggaagcaccgcgcgtcctccttggc
gggattggcgtgcacgttgtcggcaacgttcgacgcatcaacgggctgattgacatcgcg
cggcatgtggtaccgctaccttcgacgacccgcgagatcgcggcgcatgtgctcgctgtc
tcctatccgacgccggcatgccttccgacgttgcctcgccaaaaagaggaagacggctcg
tccatcgtacgtgcgacccaggctctctatgaagacttgatggatgcggcgcggccgata
acgcgcggattgcccctggttatgaccgggcatcttcatgtggcgggtggcaccgaatcc
gaaggcgcggaacgacgcattctggtcggcggacagcatgccgtagccccagatatattt
ccggcggatgcctgttatgtcgcgctcgggcatttgcataagccgcaaaccttcaaaggc
gatcgcgtgcgctacagtggctcgctcattccgctttctgccaccgagcaaccctatcgc
cacggcgttacgcttttgacgctcggtgatcgcggtgtgacgtcaatcgagcatatagaa
ctgacgcgccccgttccgtttttgcgcttgccggaaaagggagacatccggctcgacgac
ctcggcgatcattttaaggcccttgatctggacccggaccttcccatcaatcaacgtccg
ttcgtgcatgtgcggctgaaccacgaaggtttgagcgctggtttccgcgctgaagcagat
cgggttgccgagagctttcctgtgcggctcgtcgatctcaaggtcagcccgcgtcctgac
gccccgacggacactgttgcgagcggccccatcgtgcgcctttcagaacgggctcctgaa
gatttgtttgtcactgcgtttcagcggacccacggaggagagcccgacgcgtcccatcgc
gatgtcttccatcgtgcgctcgccaatgcgaatgcggaggtttga
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