Candidatus Filomicrobium marinum W: BN1229_v1_1731
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Entry
BN1229_v1_1731 CDS
T03856
Symbol
rpsA
Name
(GenBank) 30S ribosomal subunit protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
fil
Candidatus Filomicrobium marinum W
Pathway
fil03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
fil00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
BN1229_v1_1731 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
fil03011
]
BN1229_v1_1731 (rpsA)
Ribosome [BR:
fil03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
BN1229_v1_1731 (rpsA)
Bacteria
BN1229_v1_1731 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
PCB_OB
RuvA_N
Motif
Other DBs
NCBI-ProteinID:
CFX19242
UniProt:
A0A0D6JEH6
LinkDB
All DBs
Position
1:1659771..1661504
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AA seq
577 aa
AA seq
DB search
MSQTEFSKDLNPTQDEFAALLAESLAKDDIYEGAVVTGKVVGIEKDLAVIDVGLKMEGRV
PLREFSTSGSSEIKIGDEVEVYLERIENALGEAVLSREKARREESWNRLEKQFEAGEKVT
GVIFNKVKGGFTVDLDGAVAFLPGSQVDIRPVRDIGPLMHQQQPFQILKMDRRRGNIVVS
RRSVLEETRAEQRADIVARLEEGQVIDGLVKNITDYGAFIDLGGIDGLLHVTDMAWRRVN
HPSEILNVGDTVKVQIIRINPETQRISLGMKQLLSDPWEGIEAKYPVGGRFTGTVTNIAD
YGAFVELEPGVEGLIHVSEMSWTKKNIHPGKIVSTSQEVEVQILEVDSNKRRISLGLKQT
QDNPWEVFLAQHPRGTEVEGPIRNITEFGLFIGLEGGVDGMVHLSDLDWNRAGDEAIKDF
KKGDNVRAVVLDVDSQKERISLGIKQLGGDPAETIGGFKKSEIVTCEVIGVQENGIEVKL
ADTDLTTFIKRSDLSRDRSEQRPERFSVGDKLDAAVISLDKAARRINVSIKALEIAEEKK
AVAQYGSSDSGASLGDILGAAIKKSQSDDDSDEEEQD
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaaaccgaattttcaaaagatcttaaccccactcaggacgagtttgccgccctt
ctggccgaaagcctagccaaggacgacatttatgaaggtgccgtcgtcacgggtaaggtg
gtcggcatcgagaaggatctagccgtaattgacgttggtctgaagatggaaggccgcgtt
cctctgcgcgagttctccaccagcggcagttccgaaatcaagatcggcgatgaggtcgaa
gtctaccttgagcgcatcgaaaatgcgctcggtgaagcagttctgtcccgcgagaaggcc
cgccgcgaggaaagctggaaccgtcttgaaaaacagttcgaggctggcgaaaaggtgacg
ggcgtcatcttcaacaaggtcaagggcggcttcacggtcgacctcgatggtgccgtggcc
ttcctgccgggcagtcaggtcgacattcgccccgtccgcgacattggcccgctgatgcac
cagcaacagcctttccaaattcttaaaatggaccgtcgccgtggcaacatcgtcgtgtcg
cgccgctccgttctcgaagaaacgcgcgccgaacagcgcgccgacatcgtcgcccgcctg
gaagaaggtcaggttatcgacggtctggtcaagaacatcaccgactacggtgcgttcatc
gacctcggtggtatcgatggtctccttcacgtcaccgacatggcttggcgccgcgtcaac
catccttccgagatcctcaacgtcggcgataccgtgaaggtgcagatcatccgcattaat
ccggaaacgcagcgcatcagcctcggcatgaagcagttgctgtccgatccgtgggaaggc
atcgaagccaagtaccccgtcggcggtcgcttcaccggaaccgtaacgaacattgccgat
tacggtgcctttgttgagttggagccaggtgttgagggcttgatccacgtctccgaaatg
agctggaccaagaagaacatccatccaggcaagatcgtttccacgagccaggaagtggaa
gttcaaatccttgaggtcgattccaacaagcgtcgtatctcgctgggtctcaagcagacg
caagataatccttgggaagtcttcctggctcagcacccgcgcggtacggaagtcgaaggc
ccgatccgcaacatcacagaattcggtctgttcatcggtctcgaaggtggtgtcgacggt
atggtccacctctccgacctcgactggaaccgcgctggcgacgaagccatcaaggacttc
aagaagggcgacaatgtcagggctgtggttctcgatgttgacagccagaaagaacgcatt
tcgctcggtatcaagcagttgggcggcgatccggccgaaaccattggcggattcaagaag
agcgagatcgtaacctgcgaagtgatcggcgttcaggagaacggcatcgaagtcaagctg
gccgataccgacctgaccacgttcatcaagcgttcggacttgtcgcgtgaccgctccgaa
cagcgccctgagcgtttcagcgtaggcgacaagcttgatgctgccgttatcagcctcgac
aaggcggcgcgccggatcaacgtttccatcaaagcgctggagatcgccgaagagaagaag
gctgttgctcagtacggttcgtccgattcaggcgcatcactcggcgacatcttgggcgct
gcgatcaagaagagccagagcgacgacgactccgacgaggaagagcaggactga
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