Candidatus Filomicrobium marinum W: BN1229_v1_1733
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Entry
BN1229_v1_1733 CDS
T03856
Symbol
ihfB
Name
(GenBank) integration host factor (IHF), DNA-binding protein, beta subunit
KO
K05788
integration host factor subunit beta
Organism
fil
Candidatus Filomicrobium marinum W
Brite
KEGG Orthology (KO) [BR:
fil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fil03032
]
BN1229_v1_1733 (ihfB)
03036 Chromosome and associated proteins [BR:
fil03036
]
BN1229_v1_1733 (ihfB)
03400 DNA repair and recombination proteins [BR:
fil03400
]
BN1229_v1_1733 (ihfB)
DNA replication proteins [BR:
fil03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BN1229_v1_1733 (ihfB)
Chromosome and associated proteins [BR:
fil03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
BN1229_v1_1733 (ihfB)
DNA repair and recombination proteins [BR:
fil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
BN1229_v1_1733 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
YABBY
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
CFX19276
UniProt:
A0A0D6JE83
LinkDB
All DBs
Position
1:1662755..1663051
Genome browser
AA seq
98 aa
AA seq
DB search
MIKSELIQRISAANPHLYHRDVERIVNVIFDEIVDALARGDRVELRGFGAFTVKHRPARE
GRNPRTGEPVPVEEKFVPFFKTGKELRDRLNVPKKKGH
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
gtgataaagtccgaactgatccagcggatttccgctgcaaaccctcatctctatcatcgc
gatgtcgagcgcatcgtgaacgtgattttcgatgaaatcgttgatgctctggcacgcggg
gaccgggtcgaactgcgtggctttggcgcgttcaccgtcaagcaccgtccggcacgtgaa
ggccggaacccacgtactggagagcctgtaccagtcgaggaaaaattcgttccgttcttc
aagactggcaaagagctgcgtgaccgccttaatgtgccaaagaaaaagggtcactaa
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