Candidatus Filomicrobium marinum W: BN1229_v1_1745
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Entry
BN1229_v1_1745 CDS
T03856
Name
(GenBank) Double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
fil
Candidatus Filomicrobium marinum W
Brite
KEGG Orthology (KO) [BR:
fil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fil03400
]
BN1229_v1_1745
Enzymes [BR:
fil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BN1229_v1_1745
DNA repair and recombination proteins [BR:
fil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BN1229_v1_1745
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
CFX19489
UniProt:
A0A0D6JFA1
LinkDB
All DBs
Position
1:complement(1677685..1680834)
Genome browser
AA seq
1049 aa
AA seq
DB search
MSDGVVKPGAVYTVPAAASFLDVLAQAVLNGDLPHVHGPKPDPLDLTALTILVPTRRAER
AIGEAFMRAGQARALLLPRIQPVSQGDDDGALFSDLAVGANPDELEIPPAIAEMERVLLL
TQLVQKWSAAMRQPGSDPTGELAFGMVPSAGARTPAQAANMARDLANLMDLVEREGCSLD
GIADLVPDTFSEHWQKSLDFLKIITEYWPAILAARGRLSPKDRENQLILSQARRLTDLPP
ADPVIVAGVTGSIPATIELMRAVLQLPQGAIVLPALDLGLDDASWNVIPEHPEHPQFALR
KLLDGLGLNRSDVRQLPGSELTPGLAMRETLISESMRPTATTGAWHHWVATADRTDVAEA
LSGVSLVEAPAAQDEAEAIALIMRHALETPNQTAALITPDRLLARRVAIRLEAWGIRVDD
SAGRPFAKTAAGAFLELVINCLARNFAPPETMALLKHPLARLGLSAREVRFAAHALEHAV
FRKLYLGDGIPGIEAALTKARIEAASGEAPRTAQRLWDEDWERARDLVARLTEAFAPLTA
TAAMEGELPLTDLAEAHLKCALALTRLPEEERLEAPGEPLFAGEAGQTAALFFEKLLASG
DDAPDVKATDYPDLYRSLILGLNVVAKVPPHPRLSIWGPLEARLLRVDVTILASLNDGTW
PDAADPGPWLNRPMRAALGLPQPEEAIGRAAHDFTSFLAAPKVIMTRARKVDGVPSVPSR
WLLRLKALVAGLGLNDALEPNEPWLAWARLRDFAPPRAPAQPPRPTPPVEARPRKISVSG
VERWIANPYAIYARHVLRLEPLQLLGAEPDAALRGAIIHEAMSRFAKTYPVRLPDDTARE
LFRIANDVMREHASHPRIAAFWLPRFERFATWFAETEPQRRDGLQKTLAEIGGELSFESA
GGSFKLTARADRLDITNAGVAITDYKTGAPPNDRAVLDNTRPQLPLEAAIALEGGFVGVS
EQNVSLLRYIRASGGEPPGEERIIKTDDLPKLAEGALEGLKRLVAAYDNPTMAYAAVRRG
AFSYDYDDYAHLARVAEWAQFGEADGEAA
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatggggtggtcaagccgggagcagtttatacggtccccgcggcggctagtttt
cttgatgttctcgcgcaagcggttctgaatggcgacctgccacacgttcacggaccgaaa
cccgatcccctagatcttacggctcttaccattctggttccaacccgtagagccgaacgc
gccatcggcgaagcctttatgcgggcaggacaggcgcgcgcgcttttgctacctcgaatt
cagcctgtttctcagggtgatgacgacggagcgctgttctcggatttggccgtcggagcg
aacccggacgaactggaaatcccccccgccatcgccgagatggaacgggttctgctgctg
acgcagctcgtgcagaaatggtcggctgcgatgcgccagcccggcagcgatcccaccggc
gaactcgcattcgggatggtgccatcagccggggcccgaacaccggcgcaagccgccaac
atggcgcgcgacctcgcaaatctcatggaccttgtggagcgcgaagggtgctccctcgat
ggcattgcggacttggtgcctgacaccttctccgagcactggcagaaatctctcgatttc
ctcaagatcatcacggaatactggccggcgatcctggctgcacgtggccgtctttctcca
aaggatcgcgagaaccaactgattttgtcgcaagcacgccgccttaccgacttgccacca
gccgatcccgtcatcgttgcgggtgtgaccggttccattccggcaacgattgagctcatg
cgcgcggtcctgcaattgccgcagggtgctatcgtcctgcctgcgcttgatcttggattg
gatgatgcaagctggaatgtcatccccgagcaccctgagcacccgcagttcgcactgcga
aagcttctggatggcttgggtctcaatcgctcggacgtgcgtcaactgccgggttccgaa
ctaacgcccggcctcgcgatgcgtgaaacgcttatcagcgagtccatgcgaccgacagca
accacaggtgcctggcatcattgggttgcgacggctgatcggacggacgtggctgaggcc
ctatcgggtgtcagcctcgttgaagcaccggccgcgcaggacgaggccgaagccatcgcg
ctgatcatgcgccatgctctcgaaacgccgaaccaaacggcggcacttatcactcctgat
cggttgctggcacgacgcgttgctattcgacttgaagcgtggggtatccgggtcgacgac
agtgcgggccgccccttcgcgaagactgcggccggtgcatttctcgaattggttatcaat
tgccttgcccgcaatttcgcacctccggaaaccatggcgctgctcaagcacccgctggca
cgccttggtttgagtgctcgagaagtccgctttgcggcacacgcgctggagcatgcggta
tttcgaaagctctatcttggcgatggcatccccgggattgaagccgcactcacaaaggcg
cgcattgaagcagcaagcggcgaagcgccccggaccgcacagcgactttgggatgaggac
tgggagcgtgcaagagaccttgtggcacgcctgaccgaagcgttcgctccgctcacggct
acggccgccatggagggggagctcccgcttaccgatctagcagaagcgcacctaaagtgt
gccctcgccctaacgcgcctgccggaagaagaacgtttggaagctcctggcgaacctctc
tttgccggcgaagccggacagacggctgcgctattcttcgaaaaacttctggcgagcggt
gacgacgcgccggacgttaaagcgaccgactatccagacctctaccgcagtctcattctt
gggctcaatgtcgtcgccaaggtacctccgcatccgcggctttcaatctgggggcctctg
gaggcgcgccttctcagagtcgacgtgacgatccttgcttcgctcaatgacgggacgtgg
ccggatgccgccgatccgggaccttggcttaaccggcccatgcgcgcggctctcggcctg
cctcagcctgaggaagccattggccgggcggcgcacgactttacgtctttccttgcggcc
ccaaaggtcatcatgacgcgtgcgcgcaaggtggacggcgtgccaagtgtgccctcgcgc
tggctcctgcgactcaaggctcttgtcgctgggttgggactgaacgatgcgctggagccg
aacgagccttggcttgcctgggcgcgcctgcgtgatttcgcgcctccgcgtgctcccgcg
caaccgccgcgcccaacgccgcccgttgaggctcgcccacggaagatcagcgtgtcaggc
gtcgagcgctggatcgccaatccctatgcgatctacgcacggcatgttctgcgcttggag
ccgctgcagctcctcggcgccgaaccggatgcggcattgcgtggcgccattatccacgaa
gcgatgtcccgtttcgccaagacttatccggttcgtctgccagatgacacagcgcgcgaa
ctcttccgcatcgcaaacgacgtgatgcgagaacacgcaagccatccgaggatcgcggct
ttctggttgccacgtttcgaacggtttgcgacgtggtttgccgaaacggagccacagcga
cgcgacggcctgcaaaagacgctcgctgagatcggcggtgaactctcatttgaaagcgcc
ggtgggtcattcaagctgaccgcccgcgccgaccgtctcgatatcaccaacgccggcgtc
gccattaccgactacaagaccggcgcaccgcctaacgacagagcggtgttagacaacacg
cgaccgcagctcccgctcgaggcggctatcgcactggaagggggatttgtcggcgtgtcc
gaacagaacgtctctctgcttcgctatattcgtgcgtcaggcggtgagccgccgggggaa
gagcgcatcatcaaaaccgacgacctgccgaagctcgcggaaggtgctcttgagggtctc
aagcggctggtggctgcttatgacaatccaacgatggcttacgctgctgttcggcgcggg
gccttctcttatgactatgacgattatgcgcatctcgcccgcgtggctgagtgggcgcag
ttcggtgaagcggacggggaggctgcgtaa
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