Candidatus Filomicrobium marinum W: BN1229_v1_1800
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Entry
BN1229_v1_1800 CDS
T03856
Symbol
lysS
Name
(GenBank) Lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
fil
Candidatus Filomicrobium marinum W
Pathway
fil00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fil00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
BN1229_v1_1800 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fil01007
]
BN1229_v1_1800 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fil03016
]
BN1229_v1_1800 (lysS)
Enzymes [BR:
fil01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
BN1229_v1_1800 (lysS)
Amino acid related enzymes [BR:
fil01007
]
Aminoacyl-tRNA synthetase
Class I (A)
BN1229_v1_1800 (lysS)
Transfer RNA biogenesis [BR:
fil03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
BN1229_v1_1800 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1b
AAA_lid_3
MvaT_DBD
Anticodon_2
tRNA-synt_1g
Peptidase_A4
tRNA-synt_1e
Motif
Other DBs
NCBI-ProteinID:
CFX20377
UniProt:
A0A0D6JEP5
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All DBs
Position
1:complement(1743917..1745533)
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AA seq
538 aa
AA seq
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MSIDIDPDLLAAASTAKAWPFEEARRLIKRLERNKDGQEKTVIFETGYGPSGLPHIGTFG
EVARTSMVRHAFNVLTEGRRKTRLICFSDDMDGLRKVPSNVPNQEMLKEYLDKPLSRVPD
PFSSEHPSFAAHNNARLRAFLDSFGFDYEFYSATECYTSGMMDATLLRMLAAYDDVMSII
LPTLGAERRATYSPFLPVCPRTGKVLQVPMIARNVEAGTVTYVDPETGENVETKVTGGAV
KCQWKADWAMRWVALGVDYEMAGKDLIDSVTLSSKIARALGGTPPEGFNYELFLDEKGEK
ISKSKGNGLTIDEWLTYASPASLALFMFQKPKTAKRLYFDIIPKTVDEYLQFLASYEGQD
AKQKLENPVWHLHDGHPPAAELPISFALLLNLVSASNAEDKQVLWGFIRRRAPGATAENH
PLLDELADYALTYYRDFVAPTKQFRAANEQERQALSALDAALAAAPADASGADLQNLVYE
AGKSNGYTKETLREWFKAIYEVLLGSSQGPRFGSFVELYGIDNTRTLIAKGLNGELIK
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcgacattgacccggatctgctggcagccgccagtaccgctaaggcgtggcca
tttgaagaagcgcgccgcctgatcaaacggcttgagcggaataaggacgggcaagaaaaa
acggtcatcttcgagaccggctatggtccctcgggcctgccgcacatcggcacgttcggt
gaggttgcacgcacgtccatggtgcggcatgctttcaacgtgctgacagaggggcgccgc
aagacccgcctgatttgcttttcggacgacatggacggtttgcggaaggtccccagcaac
gtgccgaaccaggagatgctgaaagagtatctggataagccgttgtcgcgtgtgcccgat
ccattttcgagtgagcatccaagctttgccgcgcacaataacgcgcggctcagagccttt
ctcgacagcttcggctttgactacgaattctactctgcgaccgaatgctacacgagcggc
atgatggatgcgacactgctgcgcatgctcgccgcctatgacgacgtgatgagcatcatc
ctgccaacactcggggcagaacgtcgggcaacgtactcaccatttctgcctgtgtgtcct
cgtaccggaaaagtcctgcaggtgccgatgatcgcgcgcaacgtcgaagcgggcacagtc
acatacgtcgatcccgagactggggagaatgttgaaaccaaggtcaccggcggcgcggtc
aagtgtcagtggaaggcagattgggcgatgcgatgggtcgcgcttggcgtcgactacgaa
atggcagggaaggacctcatcgactcggtcacgttatcgtccaagatcgcacgcgcactc
ggtggcacgccgccagagggcttcaactacgagctgttcctggacgagaagggagagaag
atctccaagtccaaggggaatggcctgacgattgatgaatggcttacttacgcatcgcca
gcgagtctggcgttgttcatgttccagaagccgaagaccgcaaagcggctctacttcgat
atcattccgaagacagtggatgagtatctgcagtttctcgcgtcctacgaaggacaggac
gcgaagcagaaacttgaaaacccggtctggcacctgcacgacgggcatccgccagcagca
gaactaccgatcagcttcgcgctgttgctcaatcttgtgtccgcttccaatgccgaggat
aaacaggtgctctggggatttatccggcggcgcgcccccggggcgacggctgaaaaccat
cctctactcgacgagctcgcggactatgcgctcacctactatcgagattttgttgcgccg
accaagcagttccgagcggccaacgagcaggaacggcaagcgctcagtgctctcgatgct
gcgttggcagctgcccctgccgatgccagcggggccgatttgcaaaatctcgtttacgag
gcgggcaaatcaaacggctacacgaaggaaacgctgcgcgagtggttcaaggcgatctat
gaagtgctgctgggctcatcacagggaccgcgcttcggttcgtttgtcgaactctacggg
atcgacaacacccgtactctgatcgcgaaaggcctcaacggcgaactgatcaaataa
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