Candidatus Filomicrobium marinum W: BN1229_v1_1965
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Entry
BN1229_v1_1965 CDS
T03856
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
fil
Candidatus Filomicrobium marinum W
Brite
KEGG Orthology (KO) [BR:
fil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fil03016
]
BN1229_v1_1965 (truA)
Enzymes [BR:
fil01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
BN1229_v1_1965 (truA)
Transfer RNA biogenesis [BR:
fil03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BN1229_v1_1965 (truA)
Prokaryotic type
BN1229_v1_1965 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
CATSPERE_NTD1
Motif
Other DBs
NCBI-ProteinID:
CFX23253
UniProt:
A0A0D6JEU6
LinkDB
All DBs
Position
1:1918125..1918898
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AA seq
257 aa
AA seq
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MPRYRITIEYDGTPFVGWQTQAVGKTVQSSLQTAIASFCGETVSIRGAGRTDSGVHALGQ
VAHFDLAREQDPYRIREALNHLLRPNPIAVLECVEVGPEFDARFSATARHYLYRILDRRA
PPALDRNRVWWLPVGLDAEAMHNAAQCLVGHHDFTTFRASACQAASPVKTLDRLCVSRVG
EEVHITASARSFLHNQVRSLVGTLKLVGAGRWTRADVAEALAARRRAACGPVAPPTGLYL
VGVDYDKPEAMPGSVDH
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgccccgataccgcattacgatagaatacgacggcacgccgtttgtcggctggcagacg
caggccgtgggcaagactgtgcagtcgagcctgcaaaccgcaatagcatccttctgcggc
gaaaccgtcagcatccgtggggctggccgcacggattccggcgtgcatgctctggggcaa
gttgcgcactttgaccttgcgcgtgaacaagatccttaccgcatccgcgaagcgctcaat
cacttgcttcggccaaatccaatcgcagtcttggaatgtgtagaggtcggtcctgaattt
gatgcacggtttagcgccaccgcgcgtcactatctctaccgaatattggaccgtcgggct
ccaccggcactcgaccgcaaccgggtttggtggttacccgtcgggttggatgcggaagct
atgcataacgctgcccagtgcctcgttggccaccacgatttcacgacctttcgcgcctcc
gcctgccaggcagcgtcacctgttaaaacgttggatcggctgtgcgtttcgcgtgtgggg
gaggaagtgcacataacggcgtctgcgcgttcattcctgcacaatcaggtgcgctcgctc
gtgggcacgctgaagcttgtcggagccggccgctggacgcgcgccgatgtcgccgaagcg
ttggccgcacgccgccgcgcggcatgcggaccggtagcgccgcccacggggctctacctc
gtgggcgtggactacgataagccggaggcaatgcccggctcagtcgaccattga
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