Candidatus Filomicrobium marinum W: BN1229_v1_2237
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Entry
BN1229_v1_2237 CDS
T03856
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fil
Candidatus Filomicrobium marinum W
Brite
KEGG Orthology (KO) [BR:
fil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fil03016
]
BN1229_v1_2237 (truB)
Enzymes [BR:
fil01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BN1229_v1_2237 (truB)
Transfer RNA biogenesis [BR:
fil03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BN1229_v1_2237 (truB)
Prokaryotic type
BN1229_v1_2237 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
CFX27729
UniProt:
A0A0D6JFP2
LinkDB
All DBs
Position
1:2165666..2166589
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AA seq
307 aa
AA seq
DB search
MARRKKGRAVNGWLVLDKPLGRTSTQALGAVKRLFDAQKAGHAGTLDPLATGILPIAFGE
ATKTVSYAVDGEKAYRFTVTWGNERTTDDTEGEIVASSETRPSVAEIEALLPQFTGEISQ
VPPQFSAIKVAGNRAYDLARDGEVVELQPRIVNIDDLRLLGAVDANSAIFEAECGKGTYV
RAIARDLGRALGCYGHVSELRRLAVGSFTEEEAVSMDELVAAHEEGGAEALDSYLQPVES
ALEDLTELAVTPSDASELARGKTILLRGRDAPVFTGGFFAMCKGQLVAIGDAEKGQLRPN
RVFNLGR
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggcacgaagaaagaaaggtagggcggtcaacggttggctcgtcctcgacaagccgctc
ggtcgcacgtcgacccaagcgctgggcgcagtgaaacgcctgttcgatgcacagaaggca
ggccatgccgggacactcgatccgttggcaacaggtatcctgccgatcgctttcggtgaa
gcaacgaagactgtgtcctatgccgttgatggcgagaaggcatatcgttttactgtgacc
tgggggaacgagcgcacgacggacgatacggaaggcgagatcgtagcaagctccgagacg
cgcccctccgttgctgagatcgaagcgctgttgccgcaattcacaggcgaaatcagccag
gtaccgccgcagttctcagcgatcaaggtggcaggaaaccgcgcttacgatctcgcccga
gacggcgaggttgtcgagctgcagccgcgcattgttaacattgacgatctacgtctgctt
ggcgcggtcgatgcgaactccgcgatttttgaagcggagtgcggcaaggggacctatgtg
cgggcgatcgcgcgcgacctcggacgggccttgggctgctatggccatgtaagtgagctc
cggcgccttgccgtcggctcatttacggaggaagaagccgtttccatggatgagcttgtg
gccgcccacgaggaaggcggagcggaagcgttggactcatatctccaacccgtcgagtcg
gccctcgaagacctaacggaactcgccgtaaccccttcggacgcgtctgaactggcccgt
ggcaagaccatactcctgcgcggtcgcgacgcccccgtgttcacaggcggttttttcgcc
atgtgcaagggacagctcgtcgccatcggtgacgcggaaaaaggtcaactcaggccgaac
cgcgtcttcaatctagggcggtaa
DBGET
integrated database retrieval system
