Candidatus Filomicrobium marinum W: BN1229_v1_2267
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Entry
BN1229_v1_2267 CDS
T03856
Name
(GenBank) Formate hydrogenlyase transcriptional activator
Organism
fil
Candidatus Filomicrobium marinum W
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PAS_9
PAS
AAA_lid_14
PAS_4
Sigma54_activ_2
PAS_8
AAA_5
PAS_3
AAA
HTH_8
AAA_2
bpMoxR
IstB_IS21
PAS_7
AAA_16
AAA_7
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-ProteinID:
CFX28274
UniProt:
A0A0D6JFS6
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Position
1:2191473..2193413
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AA seq
646 aa
AA seq
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MNVIPTDILGAEASPGLADDPAARLLLTGFEASPQAQLIIFPLENAVLRANEAACRFFGL
TRAELLTTRVSDLYPDSFGELHVASEAAMVKGHTISRDLVAKAAEDASKSVEHEFVACGT
GRGAVLILKIHDLDAMQRRAVDNEANVTIRRGLEEWRKAERIFREIEQRNQLILSAAGEG
IYGVDDNGITTFVNPAAERMLGWTAEELIGRKIHDVVHSKHADGSHYPVECCPIYNAFRE
CVVTCVDDEVFWRKDGKPLWIEYTSTPLMQDGRSIGAVVIFRDISERKSNEDKLMKALDE
NAALRERLEKENAYLQEEILTHSNHHEILGTSAGTMRIIRQIDVVAPTDANVLITGESGT
GKELVAVAIHKASARKNRPLIRVNCAAIPRELFESEFFGHVKGAFSGALRDRVGRFELAD
GGTLFLDEVGEIPIDLQSKLLRVLQEGYFERVGEEHTRGVDVRIIAATNRDLEKEVLAGR
FREDLFFRLNVFPIECQPLRKRPEDIATLAQNFLSVSCRRMNISEPRMTRADMEALQRYN
WPGNARELQNVMERAAILSTRGKLQLNLPGRTDTPKEARAPAKAATSVDEDRILTAQELD
ELERSNLERALMASQGRVSGAGGAAERLQINPQTLYSKLRKLQLKI
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaatcccaaccgatatcctcggagcggaagcttctccgggtttggctgacgat
cccgcggcgcggctgcttcttacggggtttgaagcatcaccccaggcacaattaatcatc
ttcccgttggagaatgcagttctgcgtgccaacgaggctgcctgccgcttttttgggctg
acacgcgctgaactcctgacgacgagagtaagcgacctttacccggactccttcggcgag
ctgcacgtggcctcggaagcggcgatggtaaagggccatacgatttcgcgagacctcgtc
gcaaaggcagcagaggatgcgtcgaagtcggtggagcacgagtttgtggcctgcggaaca
ggcaggggcgccgtgctgatcctcaaaattcatgatctcgatgccatgcagcggcgtgcg
gtggacaacgaagccaacgtcacaattcgtcgtggtctggaagagtggcgcaaagccgag
cgcatctttcgcgaaatcgagcagcgcaatcagctcattctgtccgccgcgggtgagggc
atctatggtgttgacgacaacggcattacgaccttcgtaaatccggcggctgaaagaatg
ttgggatggactgcggaggagctgatcggccgcaagatccacgacgtcgttcactccaag
catgcggacggctcgcattacccggtggaatgctgcccaatctacaatgcgttcagggaa
tgcgtcgtgacctgcgtcgatgacgaggtgttctggcgcaaggacggcaagcccctgtgg
atcgaatacacgtcgacgccgctcatgcaggatggccgctccatcggcgctgtcgtgatc
tttcgcgatatatccgaacgcaagagcaatgaagataagctcatgaaggcgcttgatgag
aacgctgccctgcgtgagcggctggaaaaggaaaacgcctacctgcaggaagaaattctc
acgcattcgaaccaccacgaaattctggggacgtcggctggtacgatgcgcatcattcgc
cagatcgacgtcgttgcgccgacggacgccaacgttctgatcactggggagagcggaacg
ggcaaggagctggtcgcggtcgcgattcataaggcgtcagcacggaagaaccgtccgtta
attcgtgtgaactgcgcggcaattccacgtgaactgtttgaaagtgaattcttcgggcac
gttaaaggcgcgttctccggcgcattgcgtgaccgcgtcggtcgcttcgaactggccgat
ggcggaaccctctttctcgacgaggtgggcgagatcccgatcgacctccagtcgaagctc
ctgcgcgtgctgcaggagggctatttcgaacgggtaggtgaggagcacacgcgcggcgtc
gatgttcgcattatcgccgcgacgaaccgtgatcttgagaaggaggtgttggcggggcgc
ttccgcgaagatctgttcttccgtctcaatgtgtttcccatagagtgccagccgctacgg
aagcggccggaagatatagcaacgctggctcaaaacttcctgagcgtcagttgccggcga
atgaatatatctgagccacgtatgacccgcgccgacatggaggccttgcaacgctacaat
tggccgggcaatgcgcgtgaactccagaacgtcatggagcgggccgcgattttgtcgacg
cggggcaaattgcagctcaaccttccgggaagaacagatacgccgaaagaggcgcgcgcg
cccgccaaggcagcgacatctgtcgatgaagatcggatactgacggcgcaggaattggat
gagcttgaaagaagcaatctggaacgtgcccttatggcgagccaagggcgggtgtcgggc
gcaggtggcgctgccgagcgtctccagataaatccgcaaacgctctactcgaaactgcgc
aagcttcagctcaagatctaa
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