Candidatus Filomicrobium marinum W: BN1229_v1_2751
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Entry
BN1229_v1_2751 CDS
T03856
Name
(GenBank) Serine-type D-Ala-D-Ala carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
fil
Candidatus Filomicrobium marinum W
Pathway
fil00550
Peptidoglycan biosynthesis
fil01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fil00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BN1229_v1_2751
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fil01002
]
BN1229_v1_2751
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fil01011
]
BN1229_v1_2751
Enzymes [BR:
fil01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
BN1229_v1_2751
Peptidases and inhibitors [BR:
fil01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
BN1229_v1_2751
Peptidoglycan biosynthesis and degradation proteins [BR:
fil01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
BN1229_v1_2751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Peptidase_S13
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
CFX36803
UniProt:
A0A0D6JIE1
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All DBs
Position
1:2681607..2682869
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AA seq
420 aa
AA seq
DB search
MTKSACKITVDASRGEILTRFVFLGFVFFVSLLAVAPTGSSASEFRTVAKQAILIDADSG
AVLFQHNADVLAPPASMAKLVTAAVVFRALREGRLSLTDTFPVSEHAWRTGGAPSGTSAM
FAPLNSQVTIEDLLKGLIIQSGNDAAIVIAEGMSGSEAAFAKLMTEEARKIGLKKSTFGN
PTGLPHPDQLMTAREIALLSQFLIKTYPEYYGWFGERRFPYQPEGRRQPYKFFNRNPLLS
LDIGADGLKTGHLKESGYGLAGSAVQDGRRLIVVVHGLASSTARRSEAQKLLGWGFQNFS
KYKLFDSGEIVGSARVWGGEKYYVPLTGNGPIGILIPKSEESSRLRAEIVYTGPLKPPIK
QGDRVAVLRVTSASNTVNEVPLYAAEDVDEASIAWRGLDSLAVMAFRWVADQASELIGGT
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatctgcttgtaaaatcacggtcgacgcctcgcggggagaaattttgacgcgc
tttgtttttttgggatttgtttttttcgttagtttgcttgctgttgcgccaactggctct
tcggccagtgaatttcggacagttgctaagcaagcaattcttatcgacgccgacagcggt
gcagttcttttccagcacaatgctgatgttctggctccgccggctagtatggcgaagctt
gtcaccgcggcggtggttttccgtgccttgagggaagggcggttgtcgctcacggataca
tttcctgtgagcgaacatgcttggcgtacgggaggggcgccgtctggcacgtccgcgatg
ttcgcgccgctgaactctcaagtgaccattgaggatctgctcaagggcctgatcatccag
tcgggtaatgacgccgctatcgtcattgcggaaggcatgtccggatcagaagctgccttt
gcaaaattgatgacggaagaagcgcggaaaattggccttaagaagtcaacgttcggcaat
ccgacgggcttgcctcatcctgatcagttgatgacggcccgagagatcgcgttgttgtct
cagtttcttatcaagacctatcccgaatactatggttggttcggcgagcggcgttttccc
taccagcctgaagggcgtcggcagccttacaagttcttcaaccgcaatccgctcttgtct
ctcgatattggtgcagacggcctcaagacggggcatttaaaagagtcgggatacggtctg
gcgggttcggcggttcaagatggcaggcgccttatcgtggttgtccatggattagcaagc
agtacggcgcggcggtccgaagcgcaaaagctcttaggatggggctttcaaaatttctcg
aagtacaagctgttcgattctggcgagattgttgggtcggctcgagtttggggtggcgag
aaatactacgtgccactcaccggcaacggaccaattgggattctcattccgaagtcggaa
gaatcgtctcggttgagggcggaaattgtctataccggccctctcaagccccctatcaaa
cagggggatcgcgttgcggttcttcgggtcacaagtgcttcaaataccgtcaatgaagtg
cctttgtatgcggcggaggatgtcgatgaggcctcgattgcatggcgtggacttgactcg
ctggccgtgatggcgttccgctgggtcgccgatcaagcttccgagttgatcggaggaacg
tga
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