Candidatus Filomicrobium marinum W: BN1229_v1_2881
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Entry
BN1229_v1_2881 CDS
T03856
Symbol
lcfA
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
fil
Candidatus Filomicrobium marinum W
Pathway
fil00061
Fatty acid biosynthesis
fil00071
Fatty acid degradation
fil01100
Metabolic pathways
fil01212
Fatty acid metabolism
fil02024
Quorum sensing
fil04146
Peroxisome
Module
fil_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
fil00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
BN1229_v1_2881 (lcfA)
00071 Fatty acid degradation
BN1229_v1_2881 (lcfA)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
BN1229_v1_2881 (lcfA)
09145 Cellular community - prokaryotes
02024 Quorum sensing
BN1229_v1_2881 (lcfA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
fil01004
]
BN1229_v1_2881 (lcfA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fil04147
]
BN1229_v1_2881 (lcfA)
Enzymes [BR:
fil01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
BN1229_v1_2881 (lcfA)
Lipid biosynthesis proteins [BR:
fil01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
BN1229_v1_2881 (lcfA)
Exosome [BR:
fil04147
]
Exosomal proteins
Exosomal proteins of breast milk
BN1229_v1_2881 (lcfA)
Exosomal proteins of breast cancer cells
BN1229_v1_2881 (lcfA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
CFX39434
UniProt:
A0A0D6JIS3
LinkDB
All DBs
Position
1:2801962..2803689
Genome browser
AA seq
575 aa
AA seq
DB search
MTSHDVAVSPQSKAEWPWLKGYPENVDWYRTYKSAPIYVLLDEAASSHPENICTDFLGRK
LTYGEISKLVDETAAGLQALGVGAGSRVGLLLPNSPTYIVYYFAILKAGGVVVNYNPLYT
VEELSAQVVDSDTEIMVTLDLRILFDKVEALISNGTLKQAVVGSFPGLLPATKAALFKLF
KWHDLARPTASPVSDKILLDADVRKPGGKPVLREIDPDKELAVLQYTGGTTGVPKGAMLS
HANIYINTLQVSDWGPVLAHGEERFLAVLPFFHVFAMTAVMNVAVKMAASMIIMARFRLN
DTLALIHSSKPTVMPGVPTLFNAIINHPKLSSYDLSSLKYCISGGAALPLEVRTRFEELC
GCPLVEGYGLSETSPVVTCNPIDGTARSNSIGLPVPATIISLRDVDDPEREVATGEKGEL
CVKGPQVMMGYWKNPEETEKVFTKDGFLRTGDVARMDEDGRFSIVDRMKDLIICSGFNVY
PRRVEDAIYAHPDVVEVTVIGIEDSYRGEAPKAFVKLRDAAEVTEEDLMTFLEPKLSKIE
MPSVIEFREELPKTLIGKLSKKELKEEERQRRAAN
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgacgagccatgatgtcgcagtatcacctcaatccaaggctgaatggccgtggttgaag
ggctatccagagaatgtcgactggtaccgaacgtacaagagcgcgccaatttacgtgctt
ttggacgaggctgcctcgtctcatcctgagaatatctgtaccgattttttgggtcgaaag
cttacctacggtgaaattagcaagcttgtagacgaaaccgcggcgggcctgcaggctctt
ggcgtcggggctgggagccgagttggtctcctgcttccgaactcgcctacgtatatcgtt
tactattttgccatcctgaaggctggaggcgtggttgttaactataacccgctttatacg
gtcgaagagctcagtgcgcaggtggtcgatagcgataccgagatcatggtcaccttggat
ctgcgcattctgttcgacaaagtcgaggcgctgatcagcaatggaacactgaagcaggcg
gtggtggggtcgttccctggattattgcctgcgacgaaagcggcgcttttcaagcttttc
aagtggcacgatctggcccgtccaacggcttcaccggtcagcgataagattcttctggat
gccgacgtcaggaaacctggcggaaagcccgtgcttcgcgagattgatcccgacaaggaa
ctcgcggtcctccagtacacaggtggcacaaccggcgtacccaaaggcgccatgctcagc
catgccaacatctacatcaatacactgcaagtcagtgactggggtccggtgttagcgcac
ggtgaggaacgttttctcgccgttttgccgtttttccacgtgttcgccatgacggcggtg
atgaacgtggcggtgaagatggcggcgtccatgatcattatggcccgttttcgtctgaac
gatacgctagcgttaattcactcgagcaaaccgacggtcatgccgggagtgccgacgctc
ttcaatgctattattaaccatccgaaattgagctcttacgatctcagttcgctgaaatat
tgcatctcggggggggcggcgttgcccttggaggtgcgcacgcgatttgaagagctgtgc
ggttgtcctctcgttgagggctacggcttgtcggaaacctctcctgttgtgacgtgcaat
cccatcgatgggacggctcggagcaattcgattgggttaccggttccagcgaccattatt
tcgctacgtgatgtcgatgatcccgagcgggaggttgcgacaggcgagaagggcgagctg
tgcgtcaagggcccccaagtcatgatgggctattggaagaaccccgaagagacggaaaag
gtcttcaccaaggacggctttctgaggaccggcgatgttgcgcgaatggatgaggatggc
cgcttttccatcgtggaccggatgaaagacctcatcatctgctcgggtttcaacgtttac
ccgcgccgcgtggaggatgcgatttatgcgcatcccgatgttgtcgaagtcaccgttatc
ggcatcgaagactcctatcggggtgaagcgcctaaggccttcgtcaaactcagggatgcc
gccgaggttaccgaagaagatcttatgacgttccttgagcccaagctctcaaagattgag
atgccctccgttatcgagttccgcgaggaattgccgaagacgctcatcggtaaactttcc
aaaaaggagctcaaggaggaagaacgtcagcgccgcgcagcgaactga
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