Candidatus Filomicrobium marinum W: BN1229_v1_3029
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Entry
BN1229_v1_3029 CDS
T03856
Name
(GenBank) putative OmpA/MotB domain protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
fil
Candidatus Filomicrobium marinum W
Brite
KEGG Orthology (KO) [BR:
fil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fil02000
]
BN1229_v1_3029
Transporters [BR:
fil02000
]
Other transporters
Pores ion channels [TC:
1
]
BN1229_v1_3029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
BON_like
Yop-YscD_ppl_1st
BON
Yop-YscD_ppl_2nd
Borrelia_P83
Motif
Other DBs
NCBI-ProteinID:
CFX42527
UniProt:
A0A0D6JHJ1
LinkDB
All DBs
Position
1:complement(2955377..2957902)
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AA seq
841 aa
AA seq
DB search
MSCNPWRWLWGLLPLAILVWLTVVEERPRIEADLTARTQQALKVAGVDWANLTFSGREGT
LAGHTSHDAEPEKAIQIAHSVWGVRTLAADIRRADTINDYFWQAEAADSGIRLAGYVPDE
TKRNTVIGLVRERFPDRPIDDRMKIGLGGPDPDPWLKTIGFGLDRLGQVKSGNVEVHQLA
LSVSGEALSHAAYRSAKSALSGDLPPGATLIADKITPPVVSPFKWGMQKTATQIVLNGYV
PDQSTREQLFDKAKTTFPKLAIIDRMEVAGGAQEGWYAAAVAVLNSLLSLSEADVQASDG
AITLKGRTPDEATAARVVAALQSALPATFKARTDLSYPPPPPPIVSPFTTHIEMRPGFVS
LTGYVPSDAARTAVMTQLQKLLPDAKSVDKLALGSGAPEGWQACLFAGLDALAKLGNGTL
ALSDRSMQLTGRTRDEALAEALPAQVRAAANRACDSKVEIALDVPPEPNLKWRAESTGNG
ELTLEGEVPDKASETLLVSSAEQLFSGARLINKMTLASGTSEKWQKVSVAALQLLAKLRR
GEAILDGQQLTLRGEASDAAVASAVKDQISHTLPKGYVGKPEIIVRSEAMIWADKEAKRK
AAEEAARRQAEEAAKQKEEADRVAEEEAQRQAAEAEARKQEEQARLETQRATEEAARRAA
EEEAAQKAAEEARRKAEEEADRRREAEAAAAAAAQARAANKPNNDPSPSTEQQKQRKAEA
SRCEELLQSAAATGSIRFRFASARLESGSTGTLDRLVEIVKGCPDFRIEVIGHTDAIGPS
DQNLILSKERAQVVINYLTNAGVDTSRLSATGYGETRPIVPNTSASNRARNRRIEFSVKT
D
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgagttgcaatccttggcgctggctttgggggctccttccgttggccatactagtttgg
ctgacggtggtggaagagcgcccgcgtatcgaagccgacttgacggcgcgcacgcagcaa
gcgctgaaggttgccggagtcgattgggcaaatctgacgttctcgggtcgtgaaggcact
ttggccggacacacgtcgcatgacgccgaaccagaaaaggccattcaaatcgcgcacagc
gtttggggcgtccggacgttggcagccgatatcaggcgagccgacacgataaatgattat
ttctggcaggcggaagcggccgacagcggtattcgcttggcgggatacgttcctgacgag
acaaaacgcaataccgttatcggattggtccgcgagcgttttcccgatcggccgatcgac
gatcgaatgaagatcggtctgggaggccccgaccccgatccgtggctcaagacgatcggc
tttgggttggaccgtcttggccaagtcaaatctggaaatgtagaggttcaccaactggcg
ctgtccgtatcgggtgaagcgctgtctcatgctgcgtacagaagcgccaagtctgcgctc
tccggtgatctgccccctggggccaccttgatcgccgataaaattacgccgccggtcgta
tccccttttaagtggggtatgcagaagacagcgacacagatcgtcttgaacggctacgta
ccggaccagagcacacgcgagcagctgtttgacaaagcgaaaaccacattcccaaagctc
gcaatcatcgaccggatggaagtcgccggtggagcgcaggaaggatggtatgctgccgct
gttgcggttttgaatagcctgctaagcctcagcgaggcagacgtacaggcatcggatggc
gccatcacgttaaaggggcgcacccccgatgaggcgacggccgcgcgcgtggtagctgcg
cttcagagtgcgcttcccgcgacattcaaagcgcgcacagatttgagttatccgccgccg
ccgccgccgattgttagtcccttcacgacacacattgagatgaggccgggttttgtaagt
ctcacgggatatgtgccaagtgatgcggcgcggaccgccgtgatgacgcaactccagaaa
cttctgcccgatgcgaagtccgttgacaaactcgcgctggggtctggggcaccggaaggc
tggcaggcatgcctcttcgcggggctggatgctttggcaaaacttggaaacggcacactc
gcgttaagcgatcgttccatgcaactcactggcagaacgcgggatgaagcgcttgcagag
gctttgccggctcaggtgcgcgccgccgccaatcgcgcatgcgacagcaaggttgagatc
gctttggacgttccccccgagcctaatctcaagtggcgcgctgaaagcactggcaacggt
gaactaacactggaaggcgaggtgccggataaagcgagcgagacgctcttggttagcagc
gccgagcagcttttctccggggcacgtttgatcaacaagatgacgcttgcttcgggaacg
tcagaaaaatggcaaaaggtttccgttgctgccttgcagctcctcgcgaaattgcgccgt
ggtgaggccatccttgatggccagcaattgacgttgcgcggagaagcaagcgacgcagcg
gttgcctccgcagtcaaagatcagatttcgcatacgctgcctaaggggtacgtcggaaag
cctgaaatcattgtgcgttcagaggccatgatctgggcggataaggaagccaagcgcaaa
gctgctgaggaggccgcgcgccgtcaggctgaggaagcggcgaagcaaaaagaagaggcc
gatcgcgtcgccgaagaagaggcgcaacgccaggcggctgaagcggaagcgcgcaagcag
gaagaacaagcgcgccttgagacgcagcgggcaacggaggaagccgcacgccgcgctgcc
gaggaagaagcggctcagaaggctgctgaggaagcgcgacgtaaagctgaagaggaggcc
gaccggcgacgcgaagccgaggcggctgcagccgcagcagcacaagcacgagctgcgaat
aagccgaataacgatccatcgccgtcaactgaacagcagaagcaacgcaaggcggaagct
agccgttgcgaagagctgctacagtctgcagcagcgacgggctcgatacgcttccggttc
gccagtgcacgtcttgaaagcggcagcacgggaactctggaccgtttggtcgagatcgtg
aagggatgcccagacttccgcattgaggtcatcgggcacactgatgctatcgggcccagt
gatcaaaatctcatactgtccaaagagcgcgcgcaagttgtcatcaattatctgaccaat
gccggcgtcgacacgtctcgcctttcggcaactggatacggtgaaacgcgtccgatagta
cctaatacgtccgcgagtaatcgggcgagaaaccggcggatcgaattctctgtaaagacg
gattga
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