Candidatus Filomicrobium marinum W: BN1229_v1_3087
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Entry
BN1229_v1_3087 CDS
T03856
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
fil
Candidatus Filomicrobium marinum W
Pathway
fil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BN1229_v1_3087 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fil03400
]
BN1229_v1_3087 (recO)
DNA repair and recombination proteins [BR:
fil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BN1229_v1_3087 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BN1229_v1_3087 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
CFX43803
UniProt:
A0A0D6JHH6
LinkDB
All DBs
Position
1:complement(3026399..3027184)
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AA seq
261 aa
AA seq
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MDRIAETWVGARLRSIMQWTDEGIVIAVRAHGETAAVAELFSRSHGRHLGLVHGGRSRRL
RPVLQIGNHVDATWKARLADQLGHMQIELRRGFAATAMSDPGSLAALSSLCTLLHLMPER
DPHPNLYEITLFVLGFLDDDSVWPALMVRWELALLDEMGFGLDLTACAATGINDDLIYVS
PKSGRAVSASAGEPYRDKLLALPAFLIKGRKVPVTSEDVRAGLALTGHFLQTRVFAPRDA
KVPDVRHRMVELIERRAQAEA
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
gtggatcgcatcgccgaaacatgggtaggagcccggttacgctcgattatgcaatggacg
gacgaaggcattgtcatcgcggtccgtgcgcacggtgagacggcggcggtcgcggagcta
ttcagccgctcccatgggcgccatctcggtctcgtccatggcggccgctctcgtcggtta
cgccccgtgctgcaaatcggcaatcacgtcgatgcaacctggaaggcccgtctggcggat
cagttgggccatatgcaaatcgaactgcgtcggggctttgccgcaacggccatgtctgac
cccggctcgctcgccgcgctgtcatccctctgtacgctgctgcacctgatgccggagcgc
gaccctcaccccaatctctatgagatcactctctttgttctaggcttcctcgacgacgat
agcgtttggcctgccttgatggtgcggtgggaattggcactgctcgatgaaatggggttc
ggcttggacctcacagcttgtgctgcaaccggcatcaatgatgatctgatctacgtctcg
cctaagtcgggccgcgcggtatccgcgtccgctggcgaaccctatcgcgacaagcttctg
gcgctcccggccttcctgatcaaggggcgaaaagtacccgttacatccgaggatgtgcgt
gccggcttggcgctgactgggcattttctgcaaacgcgcgtcttcgcaccaagggacgct
aaggtgccggatgtgcgccaccgcatggttgaattgattgagcggcgtgcgcaggccgag
gcgtaa
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