Candidatus Filomicrobium marinum W: BN1229_v1_3344
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Entry
BN1229_v1_3344 CDS
T03856
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
fil
Candidatus Filomicrobium marinum W
Pathway
fil00260
Glycine, serine and threonine metabolism
fil00460
Cyanoamino acid metabolism
fil00630
Glyoxylate and dicarboxylate metabolism
fil00670
One carbon pool by folate
fil00680
Methane metabolism
fil01100
Metabolic pathways
fil01110
Biosynthesis of secondary metabolites
fil01120
Microbial metabolism in diverse environments
fil01200
Carbon metabolism
fil01230
Biosynthesis of amino acids
fil01240
Biosynthesis of cofactors
fil04981
Folate transport and metabolism
Module
fil_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
fil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BN1229_v1_3344 (glyA)
09102 Energy metabolism
00680 Methane metabolism
BN1229_v1_3344 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BN1229_v1_3344 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
BN1229_v1_3344 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BN1229_v1_3344 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
BN1229_v1_3344 (glyA)
Enzymes [BR:
fil01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
BN1229_v1_3344 (glyA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
CFX49175
UniProt:
A0A0D6JHL2
LinkDB
All DBs
Position
1:complement(3266564..3267874)
Genome browser
AA seq
436 aa
AA seq
DB search
MSTATAAAGADTNNFFTQSLAERDPEIADAIAKELDRQQHEIELIASENIVSKAVLEAAG
SVLTNKYAEGYPGRRYYGGCQFVDIAEQLAIDRAKKIFGCGFANVQPNSGSQANQGVFNA
LLAPGDTILGLSLAAGGHLTHGATVNQSGKWFNAVHYGVDREKHLIDFNEVRELAQKHKP
KLIIAGGSAYPRKIDFATFRQIADEVGAYFMVDMAHFAGLVAAGLYPSPFPHAHAVTTTT
HKTLRGPRGGMILTNDEALSKKFNSAIFPGIQGGPLMHVIAAKAVAFGEALQPDYKVYIK
NVIDNAKAMGEVLVENGFALVSGGTDSHLILVDLRPKKVTGDISEKAMGRAHITCNKNGV
PFDPEKPMVTSGIRLGAPAGTTRGFGVAEFRDIGRMIAEVLDGLAKNGENGNAAVEEKIK
AEAIALCKRFPIYSQN
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacagccacggccgcagcgggcgcagacaccaataacttctttactcagtcactc
gctgagcgcgacccggagattgccgacgcgatcgcgaaagagcttgaccgtcagcagcac
gagattgagctgatcgcctctgaaaacatcgtgtcgaaggctgttcttgaggcagcagga
agcgttctgacaaacaagtacgccgaaggctatcccggccgccgctactatggcggctgc
cagttcgtcgatatcgctgaacagctggcgattgatcgcgccaagaagattttcggctgt
ggcttcgccaacgttcagccgaattcgggcagccaggcaaaccagggcgttttcaacgca
ctgcttgcgccaggcgacacgatccttggtttgagtctggccgccggtggtcacttgacc
cacggtgccacggtcaaccagtcgggcaagtggttcaatgccgtccactacggcgtcgac
cgcgaaaagcacctgatcgacttcaatgaggttcgtgagctcgcgcagaagcacaaaccg
aagctgatcatcgcaggcggttccgcttatccgcgcaagatcgacttcgcgacgttccgt
cagatcgccgatgaagttggcgcttacttcatggtcgacatggcccacttcgctggcctt
gttgccgccggtctctatccgagcccgttcccgcacgcgcacgccgtcaccacgacgacc
cacaagaccctgcgcggcccgcgcggtggcatgatcctgaccaacgacgaagccctgtcg
aagaagttcaactcggcgatcttccctggcattcagggcggcccgctgatgcacgtcatc
gccgctaaggcagtcgctttcggtgaagctctgcagccggactataaagtctatatcaag
aacgtcatcgataacgccaaggccatgggcgaagtcctcgttgaaaacggctttgcgctg
gtttcgggcggcaccgattcccacctcatcctggtggacctgcgtccgaagaaggtgacc
ggcgacatctcggaaaaggcgatgggccgtgcgcatatcacctgcaacaagaacggtgtg
ccgttcgaccccgagaagccgatggtgacttcgggtatccgtctcggcgcgcctgctggc
acgacacgcggcttcggcgtcgctgagttccgtgacatcggccgtatgatcgccgaagtg
ctagatggcctcgcgaagaatggcgaaaacggcaatgcagctgtggaagagaagatcaag
gcggaagcgattgcgctttgcaaacgttttcccatctacagccagaattga
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